Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1050 ATGGTGGTCATAGAGCAGGAAGAGAGTGAGCACCGAAATGCGAGCCCCTCCAACGCCGCCGGCGCTGCCAACGACGCTTCCGACGGCTTCGAAACCGCCAGCGAGGCCGATCTCGGCAGTGATGATGACAACGGAGATGGCGGAGCAGACAGACAAGAGGAGAAGAATCACCCCGAGAAACACCACCAGCAACAGCAGACTGAGCAACAACCTGAACACGATGTTTCTCAGAGCACCACCGAATCCTCTGAGAATGCCTTAATCACCGAAGAGTCCTCCGAGAATGCCTTAATCACCGAAGAGTCCTCCGAGAATGCCTTGATCAAAGAAGAAGAATCAAGACAGAAATCATTGGATCAAGCAAATGAAGCAAAGGTAGAAGGGAACAAGCTTTTTGTAGATGGGAAGTATGAAGAGGCGTTATCACAGTATGAAGTTGCTTTACAAGTAGCACCAGACACACCTTCATCTGTGGAAATACGGTCAATATGCCATTCGAACCGTGGTGTGTGCTTTCTGAAACTGGGAAAATATGATAACACAATTAAGGAATGCACGAAAGCATTAGAACTGAATCCTGTGTACGTGAAAGCTTTTGTGAGAAGAGGAGAAGCTCATGAAAAGCTCGAGCATTTTGAAGAGGCCATTGCTGATATGAAAAAGATCTTAGAAATTGACCCCTCAAATGATCAAGCTAGGAAAACTATTCGGCGCCTAGAGCCCCTTGCTGCAGAAAAACGGGAAAAGATGAAAGAGGAAATGATTGGAAAACTGAAAGATATGGGCAATTCTGTCCTGGGCCGCTTTGGGATGAGTGTAGACAATTTTAAAGCAGTCAAAGATCCAAACACTGGTTCCTATTCTATCTCATTCCAACGCTAA 882 0.4626 MVVIEQEESEHRNASPSNAAGAANDASDGFETASEADLGSDDDNGDGGADRQEEKNHPEKHHQQQQTEQQPEHDVSQSTTESSENALITEESSENALITEESSENALIKEEESRQKSLDQANEAKVEGNKLFVDGKYEEALSQYEVALQVAPDTPSSVEIRSICHSNRGVCFLKLGKYDNTIKECTKALELNPVYVKAFVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARKTIRRLEPLAAEKREKMKEEMIGKLKDMGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQR* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1050 293 ProSiteProfiles TPR repeat profile. 196 229 IPR019734 GO:0005515
Pvu7g1050 293 MobiDBLite consensus disorder prediction 104 123 - -
Pvu7g1050 293 MobiDBLite consensus disorder prediction 44 68 - -
Pvu7g1050 293 Pfam Tetratricopeptide repeat 197 229 IPR013105 -
Pvu7g1050 293 ProSiteProfiles TPR repeat profile. 121 154 IPR019734 GO:0005515
Pvu7g1050 293 SMART tpr_5 162 195 IPR019734 GO:0005515
Pvu7g1050 293 SMART tpr_5 121 154 IPR019734 GO:0005515
Pvu7g1050 293 SMART tpr_5 196 229 IPR019734 GO:0005515
Pvu7g1050 293 Pfam Tetratricopeptide repeat 164 193 IPR001440 GO:0005515
Pvu7g1050 293 Gene3D Tetratricopeptide repeat domain 77 257 IPR011990 GO:0005515
Pvu7g1050 293 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 60 293 - -
Pvu7g1050 293 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 60 293 - -
Pvu7g1050 293 SUPERFAMILY TPR-like 117 239 IPR011990 GO:0005515
Pvu7g1050 293 MobiDBLite consensus disorder prediction 1 123 - -
Pvu7g1050 293 MobiDBLite consensus disorder prediction 69 102 - -
Pvu7g1050 293 ProSiteProfiles TPR repeat profile. 162 195 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1050 Pvu-Chr7 11558178 11564716 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1050 95 252 Calmodulin-binding Proteins AT3G25230 36.471 7.43e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1050 K24926 - gmx:100808386 399.823