Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1037 ATGAGTAGTTCAAAGTTGAGTGAGTCAGATCGTAGTGAAGAAGGTATTTACAATTGCCGTCATCGTCATGATCCAGAAATAATAGTTAGACTCGAAGAAATCTTCAAAGAATGCTCACATCCGGACGAAACACGACGCCGTCAAATAGGAGAGGAGCTTGGGCTTGATGCTAAACAAGTAAAATTTTGGTTTCAGAACAAGAAAACACAATTAAGGACTAAAAGTGAGCGATTAGATATCGATGCTCTTCGTCTTGAGAATGAAAGAATACAAACAGAAAACCGTATAATGAGTGAGACTTTGAAGAGTGTAGCATGCGAACCTTGTGGGGGTCGATCCAAGGGACAAGAAGAGCGAGAACTTTCTTTGCAAATCTTGAAGGTAGAAAATATTCTATTAATCAAAGAGTGTGAGAGAGTAATCTCATTCATGGCAAACAATGGGATTGATCCACAACTACTTCCTGCTATTCCTTCTTCTTCTTCTTCTTCACTTGATACCTTACGAGCAAGTTTGACGGTTGGAACTTCACAAAATCCACTCATTCTTAATGAGGATCCTCACATTCCTTCCCCTGCTCAACATAATATTCCAGCAGTTAATCAACATGTTCCTACTGCTACATCAACCCTTTCTCAGGATATTCCTATTCCTATTCTTAATCATGGCCATAGTCAAGGAATTCCTGCTCCTGCACTTGTTCAGCATGTTTCTTCTCTTACTGCTACTTCTCCTGCCATTCTTCATCCCTTTCCCAGTCAAGATGATTCTCTTTTGATTTCATGTCTTGAGTATAATATTCCAGCTTTGGTTACTGCTCTTGATCAAAATATTCACACACTGGCTTCTACTCATAATCAAAATAAAAATAACGTTCCCGCTGCTGAGGAACAAAGCCAATTGCAAGGACCAAATCCATGTTTAAGCGTTCCTTCTGTTACTCCTACCCTAGATCAAGATATTCCACCTCCTTGTCAAGACATTTCGTCCATTTTTCAGGATCATACGCCATCTCTTGATCTTGATCTGGATGGGATACTTAAAATTTTGAACAGCGCAAGGGTATCACAACCGACGAGCAGCGAAAATAAAGATACGGAAAAGGCACGAATGTTGAAGATTGCGAATACTGCGATGGAAGAGTTGATGAAACTCTTAAGTATGAACGAACCCTTCTGGTTCAGGTCTATTGTGGATGGGAGATTCATTCTGCAGCGTGATTGCTACCAAAGGATTTTTCAAAGGAGTAATACCTTAAAAGGACCTCATGCTCGAGTAGAGTCTTCGAAAGATTCCCGAGTGGTGAAAATGAGTGGGACGGAGCTTGTGGAAATGTTTTTAAATTCGGAGAAATGGGTTGATCTATTCCCAACAATTGTTAAAAAAGCCCAAACAATTGAAGTACTCGAAAGTGGTTCGTTAGGAAACCGAAATGGAGCTTTGCAGTTGATGAATGCAGAAATGCACATTCTTTCACCTTTGGTTCCAACTCGGGAGTTCCACTTCCTTCGTTATTGTAAACAAATTGAAGCAGGTGTATGGACCATAGCGGATGTGTCAGTTGATTCTTCGACACACAAAACCTCTACTGTTTCTACCACTCGGAGGCTCCCATCTGGATTGTTGATTCAAGAAATCACTGAGGGATTGTGCAGGGTTTCTTGGGTGGAGCATGTGGAAGTGGATGATAAGATCCAAACTCACGATCTTTTCAGAGATCTTATTTGTGGCAATAATGCATATGGAGCAGAAAGATGGGTTTTGGCACTTGAAAGAATGTGTGAGAGGATTGCAAGTGCCTCAAGTGAAACTATACCTAGTTGTGAAAGTGGAGGAGTGATTAGGTCAGCTGAGTCAAGAAGGAATATAATGCGCCTGACTCGTCGTATGGTTAAGACTTTCTGTGAGAGTTTGTGTATGCAAGATAACACGAGCTTCCCACACCTAACCAGGATGAACAATGGTGGTGTTAGAGTTGCCGTTCGAGTGAACATGAGCGAGCCTGGTGAACCTAAAGGCATGATTCTCAGTGCAGCTACCTCCTTCTGGCTTCCTCTCTCTCCACAACATGTTTTTGACTACTTGATAGATGACAGGAAACGAGCTAAGTGGGATGTTCTCTGCTATGGAAATGCAGGGCACGAAATTCAACGCATCACAACAGGTAGTAATCCTGGAAACTGTATTTCAATCATGCGGCCTTTCATCCCTAAAGTGAACAACATAGTGGTTCTCCAAGAAAGTTATGTAGATGCTTTGGGATGTGTGATGTTGTACGCTCCTTTTGACATGAAGGCATTGAACTACGCGATGAACGGAGAAGACACGTCACTGTTTCCGATTCTTCCGTCTGGCTTCACCATATCTAGGGATGGGAAAGCAAATGTTCCTGAAGGAGAATCTGGAGAAGTTGGGAAATCAGGAGGTTCCTTGGTGACTCTAATGTTTCAAATTTTGGCTTCTAGTCCATCTAGAATGAGCATGGTAGACATCGAAGTTGTAGGTAACCTTAATTCACTTGTCACCTCAACAATAGAGAATATTAAAGATGCTTTGAATTGTTTAGATTCAAAGTAG 2577 0.4144 MSSSKLSESDRSEEGIYNCRHRHDPEIIVRLEEIFKECSHPDETRRRQIGEELGLDAKQVKFWFQNKKTQLRTKSERLDIDALRLENERIQTENRIMSETLKSVACEPCGGRSKGQEERELSLQILKVENILLIKECERVISFMANNGIDPQLLPAIPSSSSSSLDTLRASLTVGTSQNPLILNEDPHIPSPAQHNIPAVNQHVPTATSTLSQDIPIPILNHGHSQGIPAPALVQHVSSLTATSPAILHPFPSQDDSLLISCLEYNIPALVTALDQNIHTLASTHNQNKNNVPAAEEQSQLQGPNPCLSVPSVTPTLDQDIPPPCQDISSIFQDHTPSLDLDLDGILKILNSARVSQPTSSENKDTEKARMLKIANTAMEELMKLLSMNEPFWFRSIVDGRFILQRDCYQRIFQRSNTLKGPHARVESSKDSRVVKMSGTELVEMFLNSEKWVDLFPTIVKKAQTIEVLESGSLGNRNGALQLMNAEMHILSPLVPTREFHFLRYCKQIEAGVWTIADVSVDSSTHKTSTVSTTRRLPSGLLIQEITEGLCRVSWVEHVEVDDKIQTHDLFRDLICGNNAYGAERWVLALERMCERIASASSETIPSCESGGVIRSAESRRNIMRLTRRMVKTFCESLCMQDNTSFPHLTRMNNGGVRVAVRVNMSEPGEPKGMILSAATSFWLPLSPQHVFDYLIDDRKRAKWDVLCYGNAGHEIQRITTGSNPGNCISIMRPFIPKVNNIVVLQESYVDALGCVMLYAPFDMKALNYAMNGEDTSLFPILPSGFTISRDGKANVPEGESGEVGKSGGSLVTLMFQILASSPSRMSMVDIEVVGNLNSLVTSTIENIKDALNCLDSK* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1037 858 Pfam Homeodomain 20 72 IPR001356 GO:0003677
Pvu7g1037 858 Coils Coil 68 100 - -
Pvu7g1037 858 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 18 854 IPR042160 -
Pvu7g1037 858 SUPERFAMILY Bet v1-like 366 598 - -
Pvu7g1037 858 SMART HOX_1 18 78 IPR001356 GO:0003677
Pvu7g1037 858 ProSiteProfiles 'Homeobox' domain profile. 20 74 IPR001356 GO:0003677
Pvu7g1037 858 CDD START_ArGLABRA2_like 368 595 - -
Pvu7g1037 858 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 18 854 - -
Pvu7g1037 858 CDD homeodomain 20 75 IPR001356 GO:0003677
Pvu7g1037 858 SMART START_1 373 596 IPR002913 GO:0008289
Pvu7g1037 858 Gene3D - 4 85 - -
Pvu7g1037 858 SUPERFAMILY Homeodomain-like 13 75 IPR009057 -
Pvu7g1037 858 Gene3D - 373 571 IPR023393 -
Pvu7g1037 858 Pfam START domain 374 596 IPR002913 GO:0008289
Pvu7g1037 858 ProSiteProfiles START domain profile. 364 599 IPR002913 GO:0008289
Pvu7g1037 858 SUPERFAMILY Bet v1-like 651 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1037 Pvu-Chr7 11106697 11115617 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1037 335 854 Homeobox Transcription Factor Family AT1G17920 43.797 4.98e-134 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pvu7g1037 START 1.6e-38 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1037 K09338 - gmx:100783586 919.457