Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1034 ATGATGCCCCCAGAGCAAGAAACCACTATTGCACCAAACATTCCACCCATATCAACCCGATCAGAGACCAGCTCCGTCCATCATGAACCAGAAGGTTCTACCACTAACAAAATCAAACCAAGTCTGGAACTCGATGATAATGACATTCCCACGCAGCATCACACTCAGCCAACTCCACCACCACCACCAAGATTATCCGTTCTTCATCAATCCTTGCGCCCCATTACCCTCAAATTCGAAGACGTGTCTTACACTATAACCTTCGAAAGCCAGAAGAAGAAGGGTTGCGTTTTACGTAATGAGTCCAAGCTAAGAAGGAAGGTGCTGAGCGGCGTGACCGGAGTAGCGAATCCCGGCGAGTTAACGGCAATGCTGGGTCCCTCCGGGAGCGGCAAGACGACCCTCTTAACCGCCCTGGCGGGAAGGCTGGCCGGAAAAGTGTCCGGCACCATAACGTACAACGGCCACAGCGACAGCTCCTTCGTGAAACGAAAGGTTGGGTTCGTTCCCCAAGACGACGTTCTCTACCCTCACCTCACAGTGTTGGAGACTCTCACTTACGCAGCTCTGTTGAGGCTGCCAAAGAGTTTGAGCAGAGAAGAGAAGAAGGAGCACGCGGAGATGGTGATCTCGGAGCTTGGCCTCACACGGTGTCGTAATAGCCCTGTTGGAGGATGCATGGCTCTGTTCCGGGGCATTTCAGGTGGGGAACGGAAACGGGTCAGTATCGGGCAGGAGATGTTGGTCAACCCGAGTTTGTTGTTCGTCGATGAGCCAACTTCGGGTTTGGACTCCACCACGGCCCAACTTATTGTGTCGGTGCTCCGAGAGCTCGCCCGGGCGGGTCGGACCGTCGTCACCACCATCCACCAGCCTTCCAGCCGGTTGTACAGGATGTTTGATAAGGTGGTGGTCTTGTCTGACGGGTACCCGATTTATAGCGGGCATGCTGGTCGGGTCATGGACTATCTCGGATCCATTGGGTATGTCCCGGCTTTCAATTTCATGAACCCGGCAGATTTCCTCCTTGACCTTGCTAATGGCATAGTTGCTGATGTCAAACATGATGATCAGATAGACCACAATGAGGATCAAGCTTCAGTCAAACAGTCCCTAATTTCATCCTTCAAGAAAAACTTATATCCTGCTCTTAAAGAAGACATTCAACAAAATAACACTAACCCTCTGGCTTTTACATCAGGAACACCTAGACGCTCTGATAACCAATGGACTACCAGCTGGTGGGGCCAATTCAGGGTGCTTCTTAAGAGGGGTTTACAAGAGAGGAGGCATGAATCTTTTTCTGGTTTAAGGATTTTCCAAGTACTGTCTGTATCCGTTCTCTCAGGACTTCTGTGGTGGCACTCTGATCCTGCCCATGTACAAGATCAGGTGGGACTCCTTTTCTTCTTCTCCATCTTCTGGGGATTTTTCCCTCTCTTCAATGCCATCTTTGCCTTTCCTCTGGAGAGGCCAATGCTAATAAAGGAAAGATCTTCAGGGATGTACCAACTCTCCTCGTACTATGTTGCCAGGATGGTGGGGGACTTACCAATGGAGCTAGTGCTTCCTACCATATTTGTAACTATTTCCTACTGGATGGGTGGTCTCAAGCCTTCATTGGTCACATTTGTGTTAACCATCTTGATCATGCTTTTTAATGTGCTAGTTTCTCAAGGCATAGGCCTAGCACTTGGTGCCATCCTCATGGATGTGAAGCAGGCCACAACTCTAGCTTCAGTGACCATGCTGGTGTTTCTCTTGGCCGGTGGTTACTATATTCAGCAAATGCCTGCTTTTATAGCATGGTTGAAGTACATTTCTTTCAGTCACTACTGCTATAAGCTTCTGGTAGCAGTCCAGTATCCAATAAATGAGGTATATGAGTGTGGACCAGGGTTACATTGTAGAGTGAGAGATTTCCCTGCCATAAAGTGTCTGGAGCTTGATGATAACATGTGGGGTGAAGTGGCTGCATTGACTGTAATGTTAATTGGATACAGAATTGTGGCATATCTAGCCTTGAGGATGGGGCAGCCTCACTGA 2046 0.4912 MMPPEQETTIAPNIPPISTRSETSSVHHEPEGSTTNKIKPSLELDDNDIPTQHHTQPTPPPPPRLSVLHQSLRPITLKFEDVSYTITFESQKKKGCVLRNESKLRRKVLSGVTGVANPGELTAMLGPSGSGKTTLLTALAGRLAGKVSGTITYNGHSDSSFVKRKVGFVPQDDVLYPHLTVLETLTYAALLRLPKSLSREEKKEHAEMVISELGLTRCRNSPVGGCMALFRGISGGERKRVSIGQEMLVNPSLLFVDEPTSGLDSTTAQLIVSVLRELARAGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGHAGRVMDYLGSIGYVPAFNFMNPADFLLDLANGIVADVKHDDQIDHNEDQASVKQSLISSFKKNLYPALKEDIQQNNTNPLAFTSGTPRRSDNQWTTSWWGQFRVLLKRGLQERRHESFSGLRIFQVLSVSVLSGLLWWHSDPAHVQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLIKERSSGMYQLSSYYVARMVGDLPMELVLPTIFVTISYWMGGLKPSLVTFVLTILIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPAFIAWLKYISFSHYCYKLLVAVQYPINEVYECGPGLHCRVRDFPAIKCLELDDNMWGEVAALTVMLIGYRIVAYLALRMGQPH* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1034 681 CDD ABCG_EPDR 74 315 - -
Pvu7g1034 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 50 678 - -
Pvu7g1034 681 Pfam ABC-2 type transporter 290 354 IPR043926 GO:0140359
Pvu7g1034 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 327 IPR027417 -
Pvu7g1034 681 Pfam ABC-2 type transporter 417 622 IPR013525 GO:0016020|GO:0140359
Pvu7g1034 681 MobiDBLite consensus disorder prediction 11 40 - -
Pvu7g1034 681 Gene3D - 92 327 IPR027417 -
Pvu7g1034 681 SMART AAA_5 118 311 IPR003593 -
Pvu7g1034 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 50 678 - -
Pvu7g1034 681 Pfam ABC transporter 111 261 IPR003439 GO:0005524
Pvu7g1034 681 ProSitePatterns ABC transporters family signature. 233 247 IPR017871 GO:0005524
Pvu7g1034 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 333 IPR003439 GO:0005524
Pvu7g1034 681 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1034 Pvu-Chr7 10966196 10970519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1034 107 309 Calmodulin-binding Proteins AT2G36910 29.245 1.16e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1034 K05681 - gmx:100783696 1221.07