Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1028 ATGACTGAAGAAAGTGCTGGAAACACAGTTGCAGCCTCTATTACCCCATTAAACTGGTGGTATCTCCAGGCAAACTCCATTTCTTCCTGGAACGATACTAATAACACATGGAACAACCAACAAAACCCTAATTCCTCCTCTTCTTGTGAGGAGGATATATCTGTTTCTACATCCTTCACTAATGCTTCCAACCATTCAAGCCTCACTGTTGAGTCCTCTCGCAGACTCATTGACCCACCTGCTCCTTCCTCCAACGAGTTGATGGGAGAACATGCTTCAGATAACCAACTTTGGAGCCATGTTCTATCAGGTGTTGGATCAAACGGCGAGTTACATAGCAGCCAAGAAATTGGAGAGAACTTTCTGGGTGCACTGTCATCAAAAAGCATGACAAGCACTATGTTTCAACCAGTCTGTGACTACTTGAAGAAACTTGATCATACCAGTTGGGAATATAGTGGTTCAACTTCATTAAACAGCTATGAGAAGCACTTAAACGGGTTTAGTGAGGCGATGATTGAGAATAATGAAAGCTTAACCAAGTTATCTAATCTTGTAAGCACTTGCTCTATTGCCCCACCAGACCCAGAAGTAAATAGCCACTTTGACCCACAAACAAACAACATATCCTTGAATTCTTCCATGGATAATTTCCCACAATCTGATCACTTCAAGCAACCTTTTGGAGACTCCACATGCTCTCTTGGAGGAGTAGCAAATAGAAATTCTGGAGTGTTCCCATGCTATGATCATGACATGAAGATCAAGCAAGAGTTTCATGCAGGTGAAGTGCAAGGATCTGTATATGGAAAATCATTAAATGCAAATGGATATCAACATGGATTTAATGGCCTTTCAGTGGGTGATAGTTGCAAACTCTACCATGGGATGCCCAATCTTCCTTCATGCACAAGAAATTTCTCAGATGTTATATCCTTTAATAGTCGATTTGGAAGGCCAGTTATTGGAATCCATGCTCAGAAGCCAAGCATGAAGTTCCTGAACGTATCTGAACCAAAGAAGCAGGGTCTTCAAGCACCATCACCGATAAGAACTAATATTAATGGAAAAGGGGAAGGTACAACACGTGAAGTAAAGAAGAAAAGATCTGAAGAATCTTCAGATGCAATGTTAAAAAAGCCTAAGCAAGATACATCAACAGCTTCTTCTTCAAAGGCACCCAAAGTCAAGCTAGGGGACAAAATCACAGCCCTTCAACAAATTGTGTCTCCATTTGGAAAGACAGATACTGCATCTGTGCTGTTTGAAGCAATAGGGTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTGAGCAACCCTTACTTGAAGGCAAACTCTCACAAGGATCCATGGGGAAGCTTGGATAGAAAAGATAAGGATGATACAAAGCTAGATCTTCGGAGCAGAGGTCTTTGTTTAGTTCCTACTTCATGTACTCCTCTAGTTTACAGAGAGAGCAGTGGACCAGATTACTGGACACCAGCATACAGAGGATGTTTGTATAGGTGA 1512 0.4147 MTEESAGNTVAASITPLNWWYLQANSISSWNDTNNTWNNQQNPNSSSSCEEDISVSTSFTNASNHSSLTVESSRRLIDPPAPSSNELMGEHASDNQLWSHVLSGVGSNGELHSSQEIGENFLGALSSKSMTSTMFQPVCDYLKKLDHTSWEYSGSTSLNSYEKHLNGFSEAMIENNESLTKLSNLVSTCSIAPPDPEVNSHFDPQTNNISLNSSMDNFPQSDHFKQPFGDSTCSLGGVANRNSGVFPCYDHDMKIKQEFHAGEVQGSVYGKSLNANGYQHGFNGLSVGDSCKLYHGMPNLPSCTRNFSDVISFNSRFGRPVIGIHAQKPSMKFLNVSEPKKQGLQAPSPIRTNINGKGEGTTREVKKKRSEESSDAMLKKPKQDTSTASSSKAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKANSHKDPWGSLDRKDKDDTKLDLRSRGLCLVPTSCTPLVYRESSGPDYWTPAYRGCLYR* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1028 503 MobiDBLite consensus disorder prediction 33 73 - -
Pvu7g1028 503 MobiDBLite consensus disorder prediction 33 89 - -
Pvu7g1028 503 MobiDBLite consensus disorder prediction 360 379 - -
Pvu7g1028 503 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 397 447 IPR036638 GO:0046983
Pvu7g1028 503 MobiDBLite consensus disorder prediction 338 393 - -
Pvu7g1028 503 CDD bHLH_AtbHLH_like 390 439 IPR045239 -
Pvu7g1028 503 PANTHER TRANSCRIPTION FACTOR BHLH111 31 489 - -
Pvu7g1028 503 Gene3D - 392 450 IPR036638 GO:0046983
Pvu7g1028 503 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 31 489 - -
Pvu7g1028 503 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 382 431 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1028 Pvu-Chr7 10810291 10813598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1028 23 503 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 34.940 6.75e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1028 - - gmx:100527800 853.973