Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1027 ACTGGCAGCAATTTCAATGTCGTGATACTCAAGCGCTTGTTCATGAGCAAGGTGAACAAACCTCCACTTTCTTTGTCAAGGTTGATTAGGCATACAAAGGGGAAGGAAGATAAAATTGTTGTTGTAGTGGGGACGGTACCTGATGATATCATAGTATATGAAGTTCCGCAATTGAAGATTACAACACTTAAGTTTACAGAGAGAGCACGTGCAAGAGTAGATAAGACATACGGTGAATGCTTGACCTTTGATCAGCTTGCACTTAGGGCTCCTTTGGGTCAGAATACGGTCCTTCTTAGAGGCCCTAAGAATGTCCGGGAAGCTGTGAAACACTTTGGTCTTGCTTCTAGTGTGCCACACAACCATTCCAAACCCTATGATCGATCCAAGGGAAGAAAGTTTGAGAAGGTTAGAGGAAGCAAGAATAACAGAGGATTTAGAGTTTAA 447 0.4251 TGSNFNVVILKRLFMSKVNKPPLSLSRLIRHTKGKEDKIVVVVGTVPDDIIVYEVPQLKITTLKFTERARARVDKTYGECLTFDQLALRAPLGQNTVLLRGPKNVREAVKHFGLASSVPHNHSKPYDRSKGRKFEKVRGSKNNRGFRV* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1027 148 MobiDBLite consensus disorder prediction 123 142 - -
Pvu7g1027 148 Pfam Ribosomal protein 60S L18 and 50S L18e 1 148 IPR021131 -
Pvu7g1027 148 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 147 - -
Pvu7g1027 148 SUPERFAMILY Ribosomal proteins L15p and L18e 3 100 IPR036227 -
Pvu7g1027 148 PANTHER 60S RIBOSOMAL PROTEIN L18 1 147 IPR000039 GO:0003735|GO:0005840|GO:0006412
Pvu7g1027 148 MobiDBLite consensus disorder prediction 117 148 - -
Pvu7g1027 148 Gene3D - 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1027 Pvu-Chr7 10765174 10765620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1027 15 148 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 73.134 2.49e-71 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1027 K02883 - gmx:100527681 246.514