Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1026 ATGAAAAGAAAGGGAGGTCATGAGAACCAAGATGCTGTTAACAGAGGTGCTTGGTCTGCTGAGGAAGACCAAATCCTTGTTAACTACGTTCACCTCCATGGAGAAGGAAAATGGGGGCAGATTTCCAGAAGAACTGGTTTAAAACGAGGGGGGAAGAGTTGCAGACTTCGATGGTTGAATTATCTAAAGCCAGATATAAAGAGAGGAAACATTTCTTCGGATGAAGAAGATCTCATTATCAGGCTACATAGCCTCTTAGGGAATAGATGGTCTCTTATTGCGGGACGGTTGCCTGGGCGTACAGACAATGAAATCAAGAACTACTGGAATACTTATTTGAGAAAGAAAGTAGAGGAGAAACACAATGATAACAACAATATGGAATTAGGAATTGAATCTCCACAGTGCACAGATATTGATCCTACCAAATCTTCTCAACCAGTAAGGTGTAATGAGGGTATGATTCCAACTGTAGCACTCAATGATTCAGTCAACACAAAGGATTGGACTGAAAACCCATTTGAATCTACCCCACCTGATCATCATGATGGCTGCGAAGAAGGTTTCCCCACACACTTTGATTTAAGTGACCTGTTGATGCCCCAGGAGGATTGCCATTTCAATGGATATGCTTGTGTTGAATTACCCCAACATTTTGGAGATGAATCATGCGGCGTTAATGATGCGATGTGTGAAACATGGTACGATAATTGGAAGAATGAAGACTATTTTCCACTAGATGATGTGGATTTTCCTTTATTTTAA 765 0.4092 MKRKGGHENQDAVNRGAWSAEEDQILVNYVHLHGEGKWGQISRRTGLKRGGKSCRLRWLNYLKPDIKRGNISSDEEDLIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKKVEEKHNDNNNMELGIESPQCTDIDPTKSSQPVRCNEGMIPTVALNDSVNTKDWTENPFESTPPDHHDGCEEGFPTHFDLSDLLMPQEDCHFNGYACVELPQHFGDESCGVNDAMCETWYDNWKNEDYFPLDDVDFPLF* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1026 254 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pvu7g1026 254 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Pvu7g1026 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pvu7g1026 254 CDD SANT 72 113 IPR001005 -
Pvu7g1026 254 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 1 243 - -
Pvu7g1026 254 SMART sant 14 64 IPR001005 -
Pvu7g1026 254 SMART sant 67 115 IPR001005 -
Pvu7g1026 254 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Pvu7g1026 254 Gene3D - 71 134 - -
Pvu7g1026 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Pvu7g1026 254 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Pvu7g1026 254 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Pvu7g1026 254 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 243 - -
Pvu7g1026 254 CDD SANT 17 62 IPR001005 -
Pvu7g1026 254 Gene3D - 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1026 Pvu-Chr7 10753884 10755216 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1026 8 116 MYB Transcription Factor Family AT5G52600 72.477 1.42e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu7g1026 Myb_DNA-binding 1.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1026 K09422 - gmx:547459 368.622