Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1024 ATGGAAAGAAAGGCCAACTGTGAGAATGAATATGCTATGAACAGAGGTCCTTGGTCTGCTGAAGAAGACAAAATTCTTATGAACTACGTTCAAGTCCATGGAGAAGGTAAATGGAGAGAGCTTTCCAAAAGAGCAGGCTTGAAAAGATGTGGCAAGAGTTGCAGACTTCGATGGCTGAATTATCTAAACCCAGATATAAAGAGAGGAAACATTTCTTCTGATGAAGAAGATCTCATTATCAGATTACACAAACTCTTAGGGAATAGATGGTCTCTAATTGCGGGACGATTACCAGGGAGAACAGACAATGAAATTAAGAACTACTGGAACACTTATTTGAGAAAGAAGGTAGAGCAGAAGTACAATCAAAACCATGTTGTTGGCCATGACAGCAACATTCCTATCAACTTAAGCTCCAAAAATTTCTTGGATGATGTTCTTGATCCTACAAAACCCCCTCACCCAATGATGATTACACCAAAATCAATGAGGTGTACCAAGGTTATGATGCCAGGCAATGATTCAGTCAGCACAATGAATTTGATCACAACGACCAGGGACCATAATAACCCTTCTGCATCCATGTCACAAGATCACCATAACCACTGTTTAACAGGTGTTTTTCAAGACTTTGATATCAGTGACTTGTTAATGTCGTACGAGGATGATTGTCGTTTCAACGGGTATGCTTGTGTTGAAATACCAGAACGTACTTTTGAAGATGAGACTTGGAGGCTTGATGATTCAATGGTTGGAGAAGCATGGTACGAGAATTGGAAGCACGACAGTTACTTTTCACAAGAACAAGATATGGTCATGGGTTTTTCTTTCTTCTAA 837 0.3967 MERKANCENEYAMNRGPWSAEEDKILMNYVQVHGEGKWRELSKRAGLKRCGKSCRLRWLNYLNPDIKRGNISSDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKKVEQKYNQNHVVGHDSNIPINLSSKNFLDDVLDPTKPPHPMMITPKSMRCTKVMMPGNDSVSTMNLITTTRDHNNPSASMSQDHHNHCLTGVFQDFDISDLLMSYEDDCRFNGYACVEIPERTFEDETWRLDDSMVGEAWYENWKHDSYFSQEQDMVMGFSFF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1024 278 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Pvu7g1024 278 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Pvu7g1024 278 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Pvu7g1024 278 SMART sant 14 64 IPR001005 -
Pvu7g1024 278 SMART sant 67 115 IPR001005 -
Pvu7g1024 278 Gene3D - 15 67 - -
Pvu7g1024 278 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 271 - -
Pvu7g1024 278 CDD SANT 72 113 IPR001005 -
Pvu7g1024 278 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 1 271 - -
Pvu7g1024 278 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Pvu7g1024 278 Gene3D - 71 132 - -
Pvu7g1024 278 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pvu7g1024 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pvu7g1024 278 CDD SANT 17 62 IPR001005 -
Pvu7g1024 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1024 Pvu-Chr7 10722076 10723191 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1024 2 117 MYB Transcription Factor Family AT3G13540 68.966 5.22e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu7g1024 Myb_DNA-binding 9.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1024 K09422 - gmx:100794570 445.277