Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu7g1023 | ATGGCGGCAGCTTCCTCATCCACTCCATTCTCGGGAACCAGAGAAGAAAGCCCTCAGATTACAACACACCATCAACCCTCCACAGTTGCTCCAATCACAGTTCCTCAAAAGAAACGGAGGAATCAACCTGGAACCCCAAATCCAGACGCGGAGGTGATAAAACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTTATATGTGAGGTGTGCAATAAAGGATTTCAAAGGGAGCAAAACCTACAGCTTCACAGAAGAGGACACAACCTTCCTTGGAAGCTAAAGCAGAAGAGTACAAAAGAGCAAAAAAGAAAGGTTTATCTTTGTCCCGAGCCCACCTGCGTCCATCATGATCCTTCAAGGGCTTTGGGAGACCTCACTGGAATCAAGAAGCACTACTCTCGCAAGCATGGTGAGAAGAAGTGGAAGTGTGAAAAGTGCTCAAAGAAATATGCTGTTCAATCTGATTGGAAAGCACATTCAAAGACTTGTGGCACTAGAGAGTACAGATGTGACTGTGGCACTCTCTTCTCTAGGCGTGACAGTTTCATCACTCATAGGGCGTTCTGTGATGCATTAGCACATGAGAGTGCAAGATACCCCAGTAGCTCAAATCCTTTGGGAACTCATTTGTTTGGCACAAACCACACTAGTTTAACCCTATCCCAAGTGGGTACCCAACTTTCCCAAGTTCAAAATCAGAACCAAACAGTCACTAACATTGGTGCAGCTCTTAAGTTTGAGCACTTGATTCCACCTCTAAATCAGTCTTCATTTGGACACTCACCACAATCAATGCCTTCCTCAGCTTTCTTCATGAATAACAACACCAATCAAACATTATTTGAAGAACACCAATCACAACAAGGACAACTATTCTCAAACAAGCAACTACATGGCCTAATGCAGCTCACTGCTCTTGATGGCAACACTAACAACTCCAATTCTTCATCAGTTGCTGCTCCTAATTCCAATCTCTTCAACCTCAGCTTCTTCCCAAGTAGCAATAGCACTAGCACCATTATCCCTGATCAATTCAACAACATAAGTGGTAGTGACCAAGGAACAACACCACCACCACTCTTTGTTAATAACAACCCTGCAGTAAGTGATCATGTGGGTTCAAGTTTTTCTTCGCTCTTTGGTGATTCAATAGAAAACGTATCATCCCCTCATATGTCTGCCACTGTGTTGCTTCAAAAAGCCTCTCAAATGGGTTCAACCACAACCACCAGCGGTTCTTCTTTACTTAGAGGAATGTCTAGCAATGGTTCCAAAGCTGAAAATGGTCACCACCACCACCACAATCTTCAAGGGTTGATGAACTCTATTGCTAATGGAAACACGTCCTTGTTTAGGAACATGCAAGGGAATGAAAACAACCTTTCTGGGTTTCACAACGTCGACGAGTCCAACCATAAGTTGCCCCAGAATCTTAATAATGTAAACTTTGGAGGTTCTGATAAGTTGACCTTAGACTTTTTGGGTGTTGGAGGAATGGTTAGAAATATGAATGGTGGATTTTCACAGAGAGAACAACTACAACAACAACAACGTGTCATGGGTACTGAGTTCTTTGGACCCTGA | 1587 | 0.4335 | MAAASSSTPFSGTREESPQITTHHQPSTVAPITVPQKKRRNQPGTPNPDAEVIKLSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEQKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESARYPSSSNPLGTHLFGTNHTSLTLSQVGTQLSQVQNQNQTVTNIGAALKFEHLIPPLNQSSFGHSPQSMPSSAFFMNNNTNQTLFEEHQSQQGQLFSNKQLHGLMQLTALDGNTNNSNSSSVAAPNSNLFNLSFFPSSNSTSTIIPDQFNNISGSDQGTTPPPLFVNNNPAVSDHVGSSFSSLFGDSIENVSSPHMSATVLLQKASQMGSTTTTSGSSLLRGMSSNGSKAENGHHHHHNLQGLMNSIANGNTSLFRNMQGNENNLSGFHNVDESNHKLPQNLNNVNFGGSDKLTLDFLGVGGMVRNMNGGFSQREQLQQQQRVMGTEFFGP* | 529 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu7g1023 | 528 | Gene3D | Classic Zinc Finger | 120 | 198 | - | - | |
Pvu7g1023 | 528 | PANTHER | ZINC FINGER PROTEIN, PUTATIVE-RELATED | 1 | 513 | - | - | |
Pvu7g1023 | 528 | Gene3D | Classic Zinc Finger | 47 | 116 | - | - | |
Pvu7g1023 | 528 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 1 | 513 | - | - | |
Pvu7g1023 | 528 | SMART | c2h2final6 | 142 | 162 | IPR013087 | - | |
Pvu7g1023 | 528 | SMART | c2h2final6 | 66 | 88 | IPR013087 | - | |
Pvu7g1023 | 528 | SMART | c2h2final6 | 107 | 137 | IPR013087 | - | |
Pvu7g1023 | 528 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 68 | 88 | IPR013087 | - | |
Pvu7g1023 | 528 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Pvu7g1023 | 528 | Pfam | Zinc-finger double-stranded RNA-binding | 66 | 88 | IPR022755 | - | |
Pvu7g1023 | 528 | MobiDBLite | consensus disorder prediction | 405 | 426 | - | - | |
Pvu7g1023 | 528 | SUPERFAMILY | beta-beta-alpha zinc fingers | 65 | 162 | IPR036236 | - | |
Pvu7g1023 | 528 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Pvu7g1023 | 528 | MobiDBLite | consensus disorder prediction | 405 | 434 | - | - | |
Pvu7g1023 | 528 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 66 | 88 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu7g1023 | Pvu-Chr7 | 10700174 | 10704561 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu7g1023 | 61 | 505 | C2H2 Transcription Factor Family | AT2G02080 | 47.292 | 8.31e-120 | 358 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pvu7g1023 | zf-C2H2_jaz | 3.2e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu7g1023 | K25870 | - | gmx:100780268 | 771.541 |