Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0989 ATGGGTAGTGTTGAAATTCCCAATTGGCTGAAAGGGTTGCCACTGGCCCCGGAATTTCGCCCTACCGACACTGAATTTGCTGACCCAATTGCTTACATTTCAAAGATTGAGAAGGAAGCTTCCGGCTTCGGGATTTGTAAGATTATCCCACCATTGCCCAAACCCTCAAAAAAATATGTTTTTTCTAATTTGAATAGGTCACTCTTGAAGTGCCCGGATTTGGGTACAGATAACAGTTCACTAGGTGTTTGTAATTCATTAAAAACCAGTTCTGGGGATGGTAGTAATGATGGGGTGTCTCGAGCCGTGTTTACTACAAGGCATCAAGAACTAGGGCAGAGTCAGAGTGTGAAAAAAGCCAAAGGAACGGTTCAGAATCCTCTGTCAGGTGTTCATAAGCAAGTATGGCAAAGTGGGGAGGTTTATACTCTGGAACAGTTTGAGTCTAAATCGAAGTCCTTTGCAAGAAGCTTGCTAGGGTCGGTGAAGGATGTTTCTCCGCTGGTTATAGAGTCTATGTTTTGGAAGGCAACTTTAGAAAAGCCAATATATGTGGAGTATGCCAATGACGTGCCTGGGTCTGCTTTTGAAGAGTCAAAGGGTCAATTTCATTATAGTCATAGAAGGCTAAGAAAAAGGACTTATTATAAGAGTAGGCTAGATAGCTCTGATTGTAAACAAACTGTAATGGGTTGCGGAAGAGATAGCCAAACTGATGAAACTAAGGGTGCTTCTGTCCTAAGTGATGCTGACACATGTTTACGGATGACCAAATCAGTTGCTACTGGGTCAACATTTTCATCGAATGAAGATTCACAATCTTTTAAGGAAAAGAGTACAGATACCGGCAATGATATGCAAGGCACTGCTGGTTGGAAGCTTTCGAACAGTCCTTGGAACCTGCAAGTTATTGCACGATCATCTGGCTCACTTACACGTTTTATGCCGGATGATATTCCTGGTGTCACTTCACCTATGGTGTACATTGGTATGCTGTTCAGTTGGTTTGCTTGGCATGTAGAGGATCATGAGCTTCACAGCTTGAATTTTCTTCACACTGGCTCATCAAAGACTTGGTATGCTGTTCCTGGAGATTATGCCTTTGCTTTTGAGGAAGTCATCCGTACTGAGGGTTATGGTGGTGATATTGATCACTTAGCCGCATTGAAACTTTTGGGTGAAAAAACAACTCTTTTGTCACCTGAGGTAATTGTTGCATCTGGAATTCCTTGTTGCAGGTTAACACAGAACCCTGGCGAATTTGTTGTGACTTTTCCAAGAGCTTATCATGTAGGATTCAGCCATGGTTTTAACTGTGGGGAAGCTGCTAACTTTGGAACTCCACAATGGCTTAGCGTAGCCAAGGAAGCTGCAGTGCGCAGAGCTGCAATGAACTATCTTCCCATGCTTTCCCATCAGCAACTACTTTACTTACTGACCATGTCTTTTATTTCAAGAGTTCCAAGAACACTATTACCTGGTGTGCGTAGCTCTCGTTTGAGAGACCGTCAGAAAGAAGAAAGGGAGTTTTCAGTAAAACAGGCTTTCATTGAAGACATGCTACAGGAAAACAAGCTGCTATCCATTCTTCTTGGAAAGGAAGCTGCTAAAAGAGCTGTTTTATGGAATGCTGATTTGCTGCCAGATTCCAGCAAAGATTTTCAGTTGCCCGATTTAACTTGTACAACTGGAACCTCTTTGGCCAACATATCAAATATTAGCTCTGCTGAAAAGAATAGTCATTATCTGCTTGATGATGAGATGAGTTTGTATTTGGATTGTTTGACTAATATAGATATTGGTGGTGATGATCTTCCCTATCACTTCCAAACTGATTCCGGAGCATTGGCTTGTGTCGGTTGTGGAATCCTTGGTTTTCCATTTATGGCTGTGATACAACCAACTGAGAAATTGACAATGGAACTTCTTCCTGATAATCATCTAATTCAAGTTTCCTCTCCGGACTCTACTACTGGTCTTCATAGTTCCATATCAAGGGATCTTTCAGTTTCTGAACTTTCATCAATAAAGGAGATGCCAGATCACTCATTAAATAAGTGTAGTAAATGTTGGGACACCTCCAGTAAATTTTTCAGGCCTCGGATTTTCTGCCTGGGGCATGCTGTTCAAATAGTAGAGATGTTGCAGAGCAAAGGTGGAGCCAATGTGCTTATAATTTGTCATTCAGACTATCAGAAAATAAAGGCACATGCCAAGGAAGTTGCGGAAGAGATACATGGTGCTTTTAATTATAATGAGATTGCATTAGATACCGCATCCCCAGAAAATTTGACCCTGATAGATCTGGCGGTTGATGGTGAAGAGCTTGATCAATGTGAAGACTGGACATCAACACTAGGCATTAACCTACGGAATTGGGTCCATGCAAGAAATAATGCTCCATCTAAACAAGTTCCTTGGACACTGGAGACATTGTTTTATGATAATTGTCCTGCTTCAAATGTTTTAGCTTTGAATTGGCTGTCTCGGAGGTCTCGGTCAAAAAGGTCGAGTCATTTAGCTCAGACTAAATCCTCTTACAGCATTGAGAGAAAAAAGGATGATCGGTTGGGTGGAAGAATAAATGACTCCATTGCTGAAAAGAAGCTAATTCAGTATTCAAGAAGGAAGTTCAAGTCAAAGCAAAGGAGTTTCCCTGTAGCAAACATGGTATGTGAATTCCAAGAGAAGTCAAAAAATGTGTCAGCTACCTTAAGTGCGGATCATAATAATTGTGTTTCTAAAACTCTTGAAGCTGAGAATTTAAGTACCGAGTGTGCATTGCCATGTGCTTCTGCTTCTACTGAAATGTCTGCAATGCATCCTGAAATCCAGATTGCTGAAATACCAATTAGCACGAAAATGAATGCTGCTAAGTCACAACCTTCAAATTCCATTCCTGGTCATATTTTAATGATTGAAGAAGTTGGAGCCGAGATTGAGAATCAAACCATGCAAGAATCACATGTAGACAGAAATAATGATTTAACACTCAGTCACTCTAAGATGCACTGCAATACCAGTGTCTCAGAAATATGTAGCAAGGAGAGCCAAGATTGTCAGGACAAGAAATGTTCTAGTGCATTTTCAAATGCAACAGATGGAAATATTGAAATGATTAGAAAGACTGAAATTGAAGAAGCAGTTATGATTGATAGCAACTGTAATAGGTTAATATTGGATGATGAAGGGCATCAAGAATATCAGTCTACCTACAAAAGCAACAAGGAGGAAGCTGCTTTATCAACTGCTTCAATGGTAAATCAATCTACACTTGCATCTATGGATGGAAATGTTGAAAGTCCAAATAATAATTATATCTCTGAAAGAGTTGGGAATCCAATTTTCCTAGAAAGGACAACTGAAGAAGAAATTGATTCTATATGTGAAACAGACAAGGAACCTCGAATTGATGGCGGGCCAATTAGTGAACATACTCCAAATGAAGTTTGTGAAGTTGGAAGGGAGTTTTATGCTTCTGCAGACCTGCATAATAACGGAATCTTGGATGGTGAGATGCAACAGGTAACTCAGGGTGGAAAAAATAGCAAAAGGGAAATAAGTCAATCTACTCATGTTTCAGCAAAACAACGGTGTCCATCGTCTGTGCAGTGTGGGATTGAAAATATGAACAAAATTAACGAGGAACCTGTTTCTAGTTATGCTGCAAAAGTTGAAAATAAAAGCGTAACTTCAATAGAGTTAGGATGTTCTGAAGTTTCAGTGGAAACCTGTACTAACAAAGACTCCTGTATTCAATTTATTCCAGATAAAGAAAAAAAAATGGAAATCCAGTCAGTTAATGCATCCATAAAGGACTCTTCTCTATCAATGCAGGAAGGCTCAAAAATTGGGAAAGAGATTTATGTTGCAGATAACATAAATGAAATCAAAGCTGATTTGTCCCAAGATAAAAGAGGGCTGGAAAGCTGTGAGTTGGCTACAGAAGTTCCCAGATTATATGCTGGGAAGAAAAAAAAGAGGAAAGTGGAACGAACGAGGAGGAACGAATCTAATTCTGACAACTTTATTAGAAGTCCATGCGAGGGGTTGAGGCCAAGAGCTGGGAAGATTGCCGCTGGAAAAAGTAGAGTAGAAATCAACCAAGTTGACAAGGAAAATCAGGTGGCTAAACGGGCAAGGAGATCTTCTGAAGTTTTGGTTCCTTGCAAAAATAAAAAAGATGGTGTTAAAAAGTCCCACAAGTGCGACCTCGATGGTTGCAGAATGAGTTTCAAGACCAAGGCAGAGTTACTGTTGCATAAACGAAACCTTTGCCCGTATGAAGGGTGTGGTAAGAAGTTCAGTTCCCACAAATATGCTTTACTTCACCAGCGTGTCCATGATGATGAGAGGCCCCTTAAGTGCCCATGGAAAGGTTGTTCCATGTCGTTCAAGTGGGCTTGGGCAAGGACAGAGCACATACGCGTACATACTGGGGAGAAGCCTTATCACTGCAAGGTGGAGGGGTGCGGCCTTTCCTTCAGGTTTGTATCAGACTTTAGCAGACACAGACGGAAAACGGGACACCATGTGAAACCTCCTGCTTGA 4551 0.4085 MGSVEIPNWLKGLPLAPEFRPTDTEFADPIAYISKIEKEASGFGICKIIPPLPKPSKKYVFSNLNRSLLKCPDLGTDNSSLGVCNSLKTSSGDGSNDGVSRAVFTTRHQELGQSQSVKKAKGTVQNPLSGVHKQVWQSGEVYTLEQFESKSKSFARSLLGSVKDVSPLVIESMFWKATLEKPIYVEYANDVPGSAFEESKGQFHYSHRRLRKRTYYKSRLDSSDCKQTVMGCGRDSQTDETKGASVLSDADTCLRMTKSVATGSTFSSNEDSQSFKEKSTDTGNDMQGTAGWKLSNSPWNLQVIARSSGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSLNFLHTGSSKTWYAVPGDYAFAFEEVIRTEGYGGDIDHLAALKLLGEKTTLLSPEVIVASGIPCCRLTQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLSVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRTLLPGVRSSRLRDRQKEEREFSVKQAFIEDMLQENKLLSILLGKEAAKRAVLWNADLLPDSSKDFQLPDLTCTTGTSLANISNISSAEKNSHYLLDDEMSLYLDCLTNIDIGGDDLPYHFQTDSGALACVGCGILGFPFMAVIQPTEKLTMELLPDNHLIQVSSPDSTTGLHSSISRDLSVSELSSIKEMPDHSLNKCSKCWDTSSKFFRPRIFCLGHAVQIVEMLQSKGGANVLIICHSDYQKIKAHAKEVAEEIHGAFNYNEIALDTASPENLTLIDLAVDGEELDQCEDWTSTLGINLRNWVHARNNAPSKQVPWTLETLFYDNCPASNVLALNWLSRRSRSKRSSHLAQTKSSYSIERKKDDRLGGRINDSIAEKKLIQYSRRKFKSKQRSFPVANMVCEFQEKSKNVSATLSADHNNCVSKTLEAENLSTECALPCASASTEMSAMHPEIQIAEIPISTKMNAAKSQPSNSIPGHILMIEEVGAEIENQTMQESHVDRNNDLTLSHSKMHCNTSVSEICSKESQDCQDKKCSSAFSNATDGNIEMIRKTEIEEAVMIDSNCNRLILDDEGHQEYQSTYKSNKEEAALSTASMVNQSTLASMDGNVESPNNNYISERVGNPIFLERTTEEEIDSICETDKEPRIDGGPISEHTPNEVCEVGREFYASADLHNNGILDGEMQQVTQGGKNSKREISQSTHVSAKQRCPSSVQCGIENMNKINEEPVSSYAAKVENKSVTSIELGCSEVSVETCTNKDSCIQFIPDKEKKMEIQSVNASIKDSSLSMQEGSKIGKEIYVADNINEIKADLSQDKRGLESCELATEVPRLYAGKKKKRKVERTRRNESNSDNFIRSPCEGLRPRAGKIAAGKSRVEINQVDKENQVAKRARRSSEVLVPCKNKKDGVKKSHKCDLDGCRMSFKTKAELLLHKRNLCPYEGCGKKFSSHKYALLHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGEKPYHCKVEGCGLSFRFVSDFSRHRRKTGHHVKPPA* 1517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0989 1516 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Pvu7g0989 1516 ProSiteProfiles Zinc finger C2H2 type domain profile. 1454 1483 IPR013087 -
Pvu7g0989 1516 SMART c2h2final6 1454 1478 IPR013087 -
Pvu7g0989 1516 SMART c2h2final6 1484 1510 IPR013087 -
Pvu7g0989 1516 SMART c2h2final6 1424 1448 IPR013087 -
Pvu7g0989 1516 SMART c2h2final6 1401 1423 IPR013087 -
Pvu7g0989 1516 ProSitePatterns Zinc finger C2H2 type domain signature. 1426 1448 IPR013087 -
Pvu7g0989 1516 SMART cupin_9 293 462 IPR003347 -
Pvu7g0989 1516 SUPERFAMILY beta-beta-alpha zinc fingers 1464 1514 IPR036236 -
Pvu7g0989 1516 Gene3D Classic Zinc Finger 1422 1510 - -
Pvu7g0989 1516 SMART JmjN_1 15 55 IPR003349 -
Pvu7g0989 1516 ProSitePatterns Zinc finger C2H2 type domain signature. 1456 1478 IPR013087 -
Pvu7g0989 1516 ProSitePatterns Zinc finger C2H2 type domain signature. 1486 1510 IPR013087 -
Pvu7g0989 1516 Pfam JmjC domain, hydroxylase 326 445 IPR003347 -
Pvu7g0989 1516 ProSiteProfiles Zinc finger C2H2 type domain profile. 1424 1453 IPR013087 -
Pvu7g0989 1516 MobiDBLite consensus disorder prediction 1325 1346 - -
Pvu7g0989 1516 PANTHER LYSINE-SPECIFIC DEMETHYLASE ELF6-RELATED 1 1505 - -
Pvu7g0989 1516 MobiDBLite consensus disorder prediction 263 291 - -
Pvu7g0989 1516 ProSiteProfiles Zinc finger C2H2 type domain profile. 1484 1515 IPR013087 -
Pvu7g0989 1516 Gene3D Cupin 9 466 - -
Pvu7g0989 1516 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1 1505 - -
Pvu7g0989 1516 SUPERFAMILY Clavaminate synthase-like 294 460 - -
Pvu7g0989 1516 SUPERFAMILY beta-beta-alpha zinc fingers 1425 1461 IPR036236 -
Pvu7g0989 1516 ProSiteProfiles JmjC domain profile. 293 462 IPR003347 -
Pvu7g0989 1516 Pfam jmjN domain 17 50 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0989 Pvu-Chr7 10156828 10169477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0989 1 904 C2H2 Transcription Factor Family AT5G04240 54.644 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu7g0989 JmjC 9.5e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0989 - - gmx:100799861 2498.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0989 7 10156828 10169477 Pvu7g0989 7 10156828 10169477 ECH