Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0987 ATGGAATATTCCAAGGGAAACCATAGCAATGGCAATGGTTCATTCAATCTTTGCAATGGTAGCAGCGACCCACTTAACTGGGGCATGGCTGCGGAAGCTTTCAGAGGTAGCCACCTTGACGAGGTGAAGCGCATGGTGGAGGACTACCGTAACCCCGTCGTCATGTTAGGTGGGAAGACCCTCACTGTGTCTCAGGTGGCCGCGGTTGCCACCTCCCATAACGGCGGCGTGAGGGTGGAGCTGGCGGAGGAAACCCGACATGGTGTGAAGGCGAGCAGTGATTGGGTGATTGATAGCATGACCAAAGGCACTGATAGCTATGGTGTCACCACGGGGTTCGGTGCAACCTCACACAGGAGAACCAAGCAAGGTGGTGCCCTCCAAAACGAACTCATCAGATTTTTGAATGCCGGCATTTTTGGTGATGCCACTGAGGCTTCTCATACGTTACCTTATTCATCTACAAGGGCAGCTATGTTGGTTAGGATTAACACTTTGCTTCAAGGATATTCAGGCATTAGATTCGAAATTATGGAGGCTATTACCAAGTTTTTAAATCATAATATAACCCCATGTCTTCCACTACGTGGTACAATCACTGCTTCAGGTGACTTGGTTCCTTTATCCTATGTTGCTGGTCTTTTAATTGGAAGACCAAACTCTAAGTCAATTGGACCTAATGGACAAGTCCTTAATGCTAAAGATGCCTTTAAGTTAGCTGGAATTGATGGAGGTTTCTTTGAGTTGCAACCTAAAGAGGGTTTGGCACTAGTGAATGGCACTGCAGTGGGATCTGGCTTGGCTTCCATGGTTCTCTTTGAAGCAAACTTACTTGTTGTTCTTTCTGAAGTTTTGTCTTCAATTTTTGCTGAAGTTATGCAAGGAAAGCCAGAATTTACAGATCACTTGACTCATAAATTGAAGCACCACCCAGGCCAAATTGAGGCTGCAGCTATAATGGAACACATATTAGATGGAAGCTCGTACATTAAAGAAGCACAAAAGTTACATGAGATTGATCCACTTCAAAAGCCGAAACAAGATAGGTATGCTCTTAGAACGTCTCCTCAATGGCTTGGACCACAAATTGAAGTAATTAGATATGCAACAAAGATGATTGAAAGAGAGATAAACTCTGTAAATGATAATCCTTTGATTGATGTTTCAAGAAATAAAGCACTTCATGGAGGGAATTTCCAAGGTACTCCAATTGGTGTTTCAATGGATAACACTCGTTTGGCCATTGCATCAATTGGGAAACTTATGTTTGCCCAATTCTCTGAACTTGTGAATGACTTCTACAATAATGGTTTACCTTCAAATCTAGCAGCTGGTCGCAATCCAAGCTTAGATTATGGATTCAAAGGTGCTGAAATAGCAATGGCATCTTATTGTTCAGAACTTCAATATCTGGCTAATCCTGTCACTACTCATGTTCAGAGTGCTGAGCAACATAACCAAGACGTCAATTCCTTAGGTTTGATTTCTTCAAGAAAAACAGCTGAAGCAATAGAAATATTAAAGCTCATGTCTTCCACTTACTTAGTTGCATTGTGTCAAGCCATTGATTTGAGACATTTGGAAGAAAACATGAAGATCGTCGTTAAGAACGTTGTTAATCAAGTGGCCAAAAGAGTTCTCACAATTGGCATCAATGGTGAGTTACATCCTTCTAGATTCTGTGAGAAGGAGTTACTTAAAATTGTTGATCATGAATATGTCTTTGCTTACATTGATGACCCATGTAGTGTAAGTTATCCATTGATGCAAAAGTTGAGATCAATTTTGGTTGATCATGCATTGCAAAATGGTGACAAAGAGGCAACTTCAAATACCTCAATTTTTCAAAAGATAAGTGCCTTTGAGGAAGAGCTCATAACCCTTTTACCTAAAGAGGTAGAAAGTGTTAGGATTGAAGTCGAGAATGGAAATCCAACTATTCCTAACCGAATTAAAGAATGCAGGTCTTACCCATTATATAAGTTTGTGAGAGAAAACTTGGGTACAGCCTTGCTAACAGGTGAGAAGGTCATGTCACCTGGTGAGGAATGTGACAAGGTTTTTACTGCACTATGTGAAGGGAAGTTTATTGATCCTATGTTGGATTGTCTAAAGAAGTGGAATGGTTCTCCTCTACCGATATGCTAA 2148 0.4125 MEYSKGNHSNGNGSFNLCNGSSDPLNWGMAAEAFRGSHLDEVKRMVEDYRNPVVMLGGKTLTVSQVAAVATSHNGGVRVELAEETRHGVKASSDWVIDSMTKGTDSYGVTTGFGATSHRRTKQGGALQNELIRFLNAGIFGDATEASHTLPYSSTRAAMLVRINTLLQGYSGIRFEIMEAITKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPNGQVLNAKDAFKLAGIDGGFFELQPKEGLALVNGTAVGSGLASMVLFEANLLVVLSEVLSSIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKEAQKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRYATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLAAGRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTAEAIEILKLMSSTYLVALCQAIDLRHLEENMKIVVKNVVNQVAKRVLTIGINGELHPSRFCEKELLKIVDHEYVFAYIDDPCSVSYPLMQKLRSILVDHALQNGDKEATSNTSIFQKISAFEEELITLLPKEVESVRIEVENGNPTIPNRIKECRSYPLYKFVRENLGTALLTGEKVMSPGEECDKVFTALCEGKFIDPMLDCLKKWNGSPLPIC* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0987 715 Gene3D Fumarase/aspartase (Central domain) 262 709 - -
Pvu7g0987 715 Gene3D - 528 649 IPR023144 -
Pvu7g0987 715 CDD PAL-HAL 59 525 IPR001106 -
Pvu7g0987 715 PANTHER HISTIDINE AMMONIA-LYASE 13 715 IPR001106 -
Pvu7g0987 715 Gene3D - 15 261 IPR024083 -
Pvu7g0987 715 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 13 715 - -
Pvu7g0987 715 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 23 705 IPR005922 GO:0005737|GO:0006559|GO:0016841
Pvu7g0987 715 SUPERFAMILY L-aspartase-like 23 715 IPR008948 GO:0003824
Pvu7g0987 715 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 197 213 IPR022313 GO:0016841
Pvu7g0987 715 Pfam Aromatic amino acid lyase 61 539 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0987 Pvu-Chr7 10124135 10128178 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0987 1 715 Monolignol Biosynthesis Gene Families AT2G37040 78.099 0.0 1197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0987 K10775 - gmx:100801470 1298.49