Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0985 ATGGAATATTCAAAGGAAAACGGCAAGAATGGCAATGGTAACACTAACTATGACCCACTTAACTGGGGCATGGCTGCGGATGCTTTGAGAGGTAGCCACCTTGAGGAGGTGAAGCGCATGGTGGAGGAATATCGTAACCCCGTCGTCAGGGTAGGTGGGAAGACACTCACCGTGTCTCAGGTCGCCGCGGTTGCAAACGGCGGCGTGAAGGTGGAGCTGGCGGAGGAAACCCGAGATGGTGTAAAAGGCAGCAGTGATTGGGTGAGTGATAGTTTGGCGAACGGCGTTGATACGTATGGGATCACCACAGGCTTTGGTGGAACCTCCTACAGGAGAACCAACCAAGGTGTTGCTCTCCAAAACGAACTCATCAGATTTTTGAATGCTGGTATTTTTGGCAATGATAAAGAAACCTCTCACACTTTACCTCACTCAATTACTAGAGCATCCATGTTGGTTAGGACCAACACCTTACTTCAAGGATACTCAGGCATAAGATTTGAAATCATGGAGGTCATAACCAAGTTTTTAAACCATAACATAACTCCTTGTCTCCCACTACGTGGCTCACTCACTGCATCAGGTGATATAATTCCCTTATCATATGTTGTTGGTCTCTTAATTGGAAGGCCAAACTCCAAATCCATTGGACCTAATGGAGAAGTTCTCAATGCTAAAGAGGCCTTTCAATTAGCAGGAATCGATGGTGGTTTCTTTGAGTTGCAACCTAAAGAGGGTTTGGCATTAGTAAATGGTACTACAGTGGGATCTGGCTTAGCATCTATGGTTCTTTTTGAGGCAAACTTACTTGTCGTTCTCTCAGAAGTCTTGGTTGCAATTTTTGTTGAAGTTATGCATGGAAAACCAGAATTTACAGATCACTTAATTCATAAATTGAAGCATCACCCTGGCCAAATTGAGGCTGCAGCCATAATGGAGCACATATTGGATGGAAGTTCATTTGTTAAGGCAGCACAAAGGTTGCATGAAATTGATCCACTTCAAAAGCTTAAACAAGATAGGTATGCTCTTAGAACATCACCTCAATGGCTTGGACCTCAGATTGAAGTAATTAGGCATGCAACAAAGATGATTGAAAGGGAGATCAACTCTGTAAGTGATAACCCCTTGGTTGATGTTTCAAGGAATAAGGCACTTCACTGTGGTAATTTTCAAGGTACCCCAATCGGTGTTTCAATGGATAACACTCGTTTGGCCATTGCATCAATTGGAAGACTAATGTTTGCCCAATTCACTGAACTTGTGAATGACTTATACAATAATGGTTTGCCTTCAAGTTTAGCTGCTAGTCACAACCCAAGCTTGGATTATGGTCTCAAAGGGGCAGAAATTGCAATGGCATCCTATTGTTCAGAACTTCAATACATGGCAAATCCTGTCACCAATCATGTGCAAAGTGCCGAGCAACATAACCAAGGGGTAAACTCATTAGGCTTAATTTCTGCAAGAAAGACAGCTGAAGCATTAGACATTTTAAAGCTCATGTGTTCCACTTATTTAGTTGCATTATGTCAAGCTATTGACCTAAGGCATTTAGAGGAAAACTTGAAGAACACTGTTAAAAATGTTGTGAGTCAAGTAGCAAAGGAAGTTTTCAGAGTTGACATTAAGCATGAGTCACACCATTTTGGATTGTATGAGGACTTGCTTAAAATTGTGGATGGTGAGTATGTTTTTTCTTACATTGATGACCCTTGTAGGACAAGTTATCCTTTGATGAAAAAATTGAGGTCAATCCTAATTGATCATGCATTACAAAATGGCAAAAAAGTGGCAAGTTTCCAAAAGATAAGTGCTTTTGAGGAAGAGCTCAAAGTTCGTTTGCCCAAAGAAGTGGAAAGTGCTAGGATTGAAATTGAGAATGGAAATCATGGTATTCCTAACCGAATTAAGGAATGCAGATCTTACTCATTATATAAGTTTGTGAGAGAAACTTTGGGTACAACTTTACTCACTGGTGAGAAAGGCAGGTCACCTGGTGAGGAATGTAATAAGGTGTTTGTTGCGTTATGTGAAGGAAAATTTATTGATCCTATGTTGAATTGTGTAAAGGAGTGGAATGGAACACCTTTACCGATATGGTAA 2106 0.4107 MEYSKENGKNGNGNTNYDPLNWGMAADALRGSHLEEVKRMVEEYRNPVVRVGGKTLTVSQVAAVANGGVKVELAEETRDGVKGSSDWVSDSLANGVDTYGITTGFGGTSYRRTNQGVALQNELIRFLNAGIFGNDKETSHTLPHSITRASMLVRTNTLLQGYSGIRFEIMEVITKFLNHNITPCLPLRGSLTASGDIIPLSYVVGLLIGRPNSKSIGPNGEVLNAKEAFQLAGIDGGFFELQPKEGLALVNGTTVGSGLASMVLFEANLLVVLSEVLVAIFVEVMHGKPEFTDHLIHKLKHHPGQIEAAAIMEHILDGSSFVKAAQRLHEIDPLQKLKQDRYALRTSPQWLGPQIEVIRHATKMIEREINSVSDNPLVDVSRNKALHCGNFQGTPIGVSMDNTRLAIASIGRLMFAQFTELVNDLYNNGLPSSLAASHNPSLDYGLKGAEIAMASYCSELQYMANPVTNHVQSAEQHNQGVNSLGLISARKTAEALDILKLMCSTYLVALCQAIDLRHLEENLKNTVKNVVSQVAKEVFRVDIKHESHHFGLYEDLLKIVDGEYVFSYIDDPCRTSYPLMKKLRSILIDHALQNGKKVASFQKISAFEEELKVRLPKEVESARIEIENGNHGIPNRIKECRSYSLYKFVRETLGTTLLTGEKGRSPGEECNKVFVALCEGKFIDPMLNCVKEWNGTPLPIW* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0985 701 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 9 700 - -
Pvu7g0985 701 Gene3D - 520 635 IPR023144 -
Pvu7g0985 701 CDD PAL-HAL 54 517 IPR001106 -
Pvu7g0985 701 SUPERFAMILY L-aspartase-like 18 700 IPR008948 GO:0003824
Pvu7g0985 701 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 18 691 IPR005922 GO:0005737|GO:0006559|GO:0016841
Pvu7g0985 701 Gene3D - 9 253 IPR024083 -
Pvu7g0985 701 PANTHER HISTIDINE AMMONIA-LYASE 9 700 IPR001106 -
Pvu7g0985 701 Gene3D Fumarase/aspartase (Central domain) 255 695 - -
Pvu7g0985 701 Pfam Aromatic amino acid lyase 56 534 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0985 Pvu-Chr7 10062183 10065569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0985 18 700 Monolignol Biosynthesis Gene Families AT3G53260 74.096 0.0 1083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0985 K10775 - gmx:100818777 1122.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1842 1 44144036 44144760 Pvu7g0985 7 10062183 10065569 ECH
Pvu7g1548 7 37020027 37024239 Pvu7g0985 7 10062183 10065569 ECH
Pvu7g0985 7 10062183 10065569 Pvu7g0985 7 10062183 10065569 ECH