Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0973 ATGTTTAAGGTTATGGAAAACATGGAGAGGAGTTCAGAAAGGTGCTTAGATTCTCAACTGTGGCATGCCTGTGCTGGTGCCATGGTTCAAATGCCACCTCTCAACACAAAAGTCTTCTACTTTCCCCAGGGCCACGCGGAACACGCTCATGGGAAAGTAGATTTTGGCCAAACCCGGGTTCCGCCACTCGTCCCTTGCAGACTCTCTGGAATGAAATACATGGCAGACCCTGACACAGACGAGGTGTATGTCAAAATGAGGCTGATCCCTTTGAGGGAACATGAATTGGATTTGGAGGATGATTGTTTCTTGGGGAACACTGGAGTGGAGGGTCAAGAGAAACCTCCTACCTCTTTTGCCAAGACACTCACACAATCTGATGCCAACAATGGTGGAGGGTTTTCTGTGCCTCGTTACTGTGCTGAAACCATCTTCCCGAGGTTGGACTATTCAGCTGAGCCTCCAGTTCAGACAATCATCGCCAAGGATATGCATGGACAGTGCTGGAAGTTTAGGCATATCTATAGAGGGACGCCTAGGAGGCATCTTTTGACCACTGGATGGAGCAATTTTGTGAACCAGAAGAGGCTTGTTGCTGGGGACTCCATTGTGTTTCTGAGGGCAGAAAACGGGGATCTTTGTGTTGGGATAAGGAGGGCTAAGAAAGGGATTGGTGGAGGGTCTGAGTTCTCTTCCGGATGGAACCCTCTCTTTGGTGGGGGTTCTGGATTCTTGTGTGGGAGTGAGAGCAGCTTGGTGGGTGGTGCAAAAGGTGGCGGTGACGAGATGGTGGGAAGAGTGGCTGCTGAATCTGTTGTTGAGGCTATATCTTGTGCTGTTAATGGTAGTCCCTTCGAGGTTGTGTACTATCCAAGAGCAAGTTCCCCTGAGTTTTGTGTTAAGGCTTCTGTTGTGAAGGCTGCAATGCAAATTCAGTGGTGTTCTGGGATGAGATTCAAAATGCCCTTTGAAACTGAGGATTCTTCTAGGATTAGCTGGTTCATGGGAACCATTTCTTCTGTTCAGGTTGCAGATCCCATTCGTTGGCCTGATTCTCCTTGGCGTCTTCTGCAGGTGGTGTGGGATGAACCAGATTTACTTCACAATGTCAAGTGTGTAAACCCTTGGCTGGTTGAACTAGTCTCTAACATGCCCACCTTCAATCTCTCTGCATACTCACCTCCTAGAAAGAAACAACGCTTCGTTCATGACCCATATTTTCAAGTCATCAACCAACTCCCAATGCCATCATTCTCTAGCAACCTTCTCAACTACACCAATTCTCTTTGTAACATTGAGAATAGTAGTTCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGACTATCTCCATCTGATTTTCCCTTCAACAAGCTCCCAGCAGAGATGCTTCTAGGAGGGTTCTCTAGGCTTGACCATGCAACAAAACCTATTAGGCCTCCTTGTGGAACCTATAAGAACAACACTTCTAATACTACTACTAAGACCAATGTTGACATATCTTGCCTGTTGACTGTGGGAAATCCTAACCAGAATTTCAAGGAATCCAATGCTACAAAAGCACCTCACATCTTGTTATTTGGAAAACTCATTCACACAGAGCAAAAGAGTTCAAACACTAGCTCTGCCAGTACAACTGGGAATAGTGTGTCCGAGGGGAATTCACTCAAGACATCTAATGCTTCTGATGGCTTAGGTTCTGCTTTGCACCAAAATAGCCCAATTGAGACGAATAATTCTGATGGAGGGTCTCCCTGGTACAAGGAACAGCACATGGCTGATCTTGGAACCGACAACGTTAACACGTTATGCATTGCTTTGTAA 1827 0.4652 MFKVMENMERSSERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKVDFGQTRVPPLVPCRLSGMKYMADPDTDEVYVKMRLIPLREHELDLEDDCFLGNTGVEGQEKPPTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGSEFSSGWNPLFGGGSGFLCGSESSLVGGAKGGGDEMVGRVAAESVVEAISCAVNGSPFEVVYYPRASSPEFCVKASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPDSPWRLLQVVWDEPDLLHNVKCVNPWLVELVSNMPTFNLSAYSPPRKKQRFVHDPYFQVINQLPMPSFSSNLLNYTNSLCNIENSSSAGIQGARHAQFGLSPSDFPFNKLPAEMLLGGFSRLDHATKPIRPPCGTYKNNTSNTTTKTNVDISCLLTVGNPNQNFKESNATKAPHILLFGKLIHTEQKSSNTSSASTTGNSVSEGNSLKTSNASDGLGSALHQNSPIETNNSDGGSPWYKEQHMADLGTDNVNTLCIAL* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0973 608 SUPERFAMILY DNA-binding pseudobarrel domain 110 220 IPR015300 -
Pvu7g0973 608 ProSiteProfiles B3 DNA-binding domain profile. 119 221 IPR003340 GO:0003677
Pvu7g0973 608 Gene3D - 117 221 IPR015300 -
Pvu7g0973 608 MobiDBLite consensus disorder prediction 538 586 - -
Pvu7g0973 608 Pfam Auxin response factor 276 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pvu7g0973 608 Gene3D - 313 386 - -
Pvu7g0973 608 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 8 579 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pvu7g0973 608 MobiDBLite consensus disorder prediction 538 590 - -
Pvu7g0973 608 CDD B3_DNA 118 219 IPR003340 GO:0003677
Pvu7g0973 608 Pfam B3 DNA binding domain 119 220 IPR003340 GO:0003677
Pvu7g0973 608 SMART B3_2 119 221 IPR003340 GO:0003677
Pvu7g0973 608 PANTHER AUXIN RESPONSE FACTOR 16 8 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0973 Pvu-Chr7 9869289 9872915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0973 1 594 B3 DNA Binding Superfamily AT4G30080 55.980 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pvu7g0973 B3 2.6e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0973 - - gmx:100803053 1087.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0973 7 9869289 9872915 Pvu7g0973 7 9869289 9872915 ECH