Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0954 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCCGAGTCGCTTGGGTCCGTCGCTAGATGGAGGGATTCCTCGCACCACCGCGAGTTCAATCGCTGGGGACCCACTGAGTTTCGCAGGCCGCCAGGTCATGGTAAGCAGGGTGGTTGGCACCTGTTTTCCGAGGACTCAGGTCATGGGTATGCGATTTCTCGGTCAAGCAGTGACAAGATCCTGGAGGAAGATAGTCGGCCCTCGATTTCACGAGGTGATGGGAAGTATGGCAGGAGCAGCAGGGAAAATAGAGGAGCCTTTGCTCAGAGAGATTGGAGAGGGCATTCGTGGGAACCCTCCAATGGTACCATGAATTTGCCCAGAAGGCCGCAGGATGTGAACAATGATCAGAGGGCTGTGGACGACGCCCTAGCATATTCTTCTCATCCACATTCCGATTTCGGGAACTCTTGGGATCAGCACCATTTAAAAGACCAGCATGAGAAGATAGGTAGTGTCAATGGGATGGGAACTGGCCCCAGAAGTGATAGAGAGAACTCTCTGGGTGACTGGAAACCACTTAAATGGACACGTTCTGGAAGCTTGTCTTCTCGAGGCTCAGGGTTTAGCCACTCAAGTAGCTCAAGGAGCATGGGAGCAGCAGATTCGCATGAAGCGAGGGCTGAGTTGCAAACGAAAAGTGCGGCTGCTAATGAGTCGCATTCAGGGGAAGCTGCTGCTTGTGCGACATCTTCTGTGCCATCTGAAGATACGGCTTCTAGAAAAAAGCCAAGGTTGAATTGGGGCGAGGGACTTGCAAAGTATGAGAAGAAAAAAGTAGAGGTGCCCGAGCCAAGTGCAAATAAAGATGGTCCTGTTTTGTCTGCTAGTATCACTGAACCTTGTAATTTCCTCAGTACCAGCTTAGTTGACAAAAGTCCAAAAGTTACAGGATTTTCTGAATGTGCATCTCCTGCAACTCCATCTTCTGTCGCCTGCAGTTCCTCACCTGGTATGGACGATAAATTATTCGGAAAGACTGCAAATGTAGACAATGATGTTAGTAATTTTATTTGTTCACCTGCTCCGTTGTCGGAAAATAATTTGCAGAGGTTTCCCTTTAACTTAGAGAAATTTGATATTGGCTCCTTGAATAATTTGGGTTCTTCAATTATTGAGTTGGTAAAATCTGATGATCCAACTTCTGTAGATTCTGGTCCAATGAGGTCTAATGCAATTAATAAATTACTGATATGGAAAGCTGACATTTCAAAGGTGTTGGAGATGACTGAATCTGAAATAGATTTACTTGAAAATGAACTGAGGTCGCTGAAGTCTGAATCTAGGGAAACATGTCAATTTCCGGTATCCTTGGACTCCCAGATGTTAGGTTGTGATGAAAAATCCTGTGAAGAACATGTTGGAGTCTCTGATCAGGTCACCCGGCCGGTACCTTTGAATATTGTTGATGATCCCAATATGGAGAAGGTGCCGCTTTCAACTAATTTACTTAGTATTCATGAAAGTGTTAAGGAAGAGGATATTGATAGTCCTGGAACAGCTACTTCTAAATTTGTTGAGCCTCCACCTTCAATTAAATCAGTTTCTTGTGGTACTGGAGGATATGTTAGTTTCTCCAGGGACGTGGATTCTGTTCCATCTGCAGCTGTGAACTGCCTAATTCCCTGTTCTGCTAGGAAGGATGTTAGTGTATGTGTATCTTCTGTTGATGGCAAGACTTCTATGGAGGTAAACGATAGCATGGATATTTTATGGGGTACAATTATTTCTTCTAATAAAGAATCTGCCAACAAAGCTAGTGAGGTGTTTGATAATTTATTGCCCAAAGATTGTTGTAAGATTGGGAAGATGGAAACCAGCAGTGACACATGCAATCATACCTTCATTAGGGAAAAATTTGCTGAGAAAAAGCGATTTGCTAGGTTTAAGGAGAGAGTTATTGCACTTAAGTTCAGAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCTTACTTTCTATCAGGAAATGCCGACCAAAATCTCACAAAAAGAATGAACTAAGTGTGCGAACTACCTGTAATGGTAACCAGAAGAATCGATCATCCATTCGTTCACGTTTTCCCTTTCCTGGAAATCATCTGAGCTTGGTTCCAACATCAGAGATGATTAATTTTACAGGCAAACTGCTTTCAGAATCTCAGGTTAAAGTGCAGAGAAACACTCTGAAGATGCCGGCATTAATTTTAGATGAAAAAGAGAAGATAATTTCAAAGTTTGTATCTAGTAATGGGCTGGTTGAAGATCCATTGGCTATTGAGAAAGAAAGGTCTATGATTAATCCTTGGACGCCACAAGAGAGAGAAGTTTTCTTGGAGAAATTTGCTGCCTTTGGAAAAAACTTTAGGAAAATTGCTTCTTTTCTTGACCACAAGACAATTGCTGACTGTGTTGAATTCTACTACAAAAATCATAAATCTGATTGTTTTGAGAAACTTAAGAAGCAAGATGTTGGTAAGCTGGGGAAGTCATTTTCAGCTAAAACTGACTTGCTGGCATCAGGTAACAAAAAAATCCGTGCAGGAAGCTCACTATTGGGTGGATATGGTAAAGTAAAGACATCGAGGGTTGAAGACTTCATTGAGAAATCAGGCAGTTTTGACATTCTTGGGGATGAAAGAGAGACTGCTGCTGCGGCTGATGTATTGGCAGGTATATGTGGTTCTCTTTCATCTGAGGCTATTAGTTCCTGCATAACAAGTTCTGTTGATCCAGTAGAAGGTAGCAGGGATAGGAAGTTCCTGAAAGTAAACCCTTTATACAAGCTGCCCATGACACCTGATGTTACTCAGGATGTTGATGATGAGACTTGTTCAGATGAGAGCTGTGGTGAAATGGATCCTACAGATTGGACTGATGATGAGCGGGCTGCTTTTCTTCAGGCTGTATCATCTTTTGGGAAAGATTTTGCCAAGATAGCACGGCGTGTTGGGACAAGGTCTCAAGAACAGTGCAAAGTTTTCTTCAGCAAAGGCCGGAAATGTCTTGGATTAGATCTCATGCGCCCAATCTCTGAAAATGTTGGATCCCCAGTGAATGATGATGCAAATGGGGGTGAGAGTGACACTGATGATGCATGTGTCGTTGAGACAGGCTCGGTGGTTGGAACTGAAAAGTCTGGCACTAAAACAGATGAGGACCTGCCTTTGTATGGAACAAACACATTCAACGATGAGTCCAATCCTGTGCAAGCTAGGAATCTGTCAGCAGAATTAAATGAATCAAAGGGGACTAATGGGACAGAAGTAGATATTGAAGATGCAAATTTGGTTTCTGATGCATGTGCAATTGATATTGATTCTAAACAGGGCTGTGATGGTAGTGAATTTGCCGCGTGTGGTTCTGTCAGTGGACAAGCAATGTCAGATAGTACAGAAAATGGGAAAGATAAAGCTAATAAATTGGGAGGTGCATCTATAGAATTGATATCTGTTCCAGATACAAGTGAACCATGCGAAAGTAATTCTTTTGTTGGGGATAGAATGGTGGTTTCCGAGGTTTCTTCTGACAGACTTGGAAATGAATTGGAGAGGCAAAGAGTGTCTTCACCCCGATGTCTTGACGATAGAGATAATAAACAGGAAGCTGATTCAGGTGGCATAGTTGATTTGAAAAGCCCTGGGCACATGCTAAGCAGCACTGTTGTAAATGCTTCTCTCTCATCTTTTGGGAATTCCTGTTCAGGATTGAGTTCTAGTACTGAAAATAAGCACGGACCCCTTAGAAAGGCCTCCCCATTGTCTATGGATGATCATCAAGCATCATCAAATTCATCTTTACAAAATACTGTTGCTTCTGATATTCAGTGTGAGAAAACAGCTAGCCAAGATAGATTGTCTTCTACCTGTGATATTCAGGTTAGCACCGATGACAAGCCCCCTATTACTGGGAATTCATCAGACCATGTTGATGCCGGAAGCATTCTCCAGGGCTATCCCTTGCAAGCTCCCATTAAGAAGGAGATAAATGGTGATATGAACAGTAGCAGTTCAGCAACAGAATTGCATCTTTTGTCCCAGAAAAATGAACAGCCTGATGATCAAACCAAAAAATTGCAGTCGTCTGATTCAGATAAAGCATCCAGAAATGGTGATGTGAAACTTTTTGGGAAGATACTAACTAATCCTTCATCGGCACAGAAACCTAATGTGGGTGCTAAAGGTAGTGAAGAAAATGGTACCCACCATCCTAAGTTCAGCAAGCCTTCTAGTATGAAATTTACCGGGCATAGTGCTGATGGGAATGTGAAAATTTTGAAGTTTGACTGTAATGATTATGTTGGCCTTGAAAATGTTCCTATGAGAAGTTATGGTTATTGGGATGGAAGCAGAATACAGACTGGTCTCTCTTCATTGCCTGATTCTGCTATCCTGCTAGCAAAGTATCCTGCAGCATTCAGTAATTATCCCACATCTTCTGCCAAATTGGAGCAACCGTCATTGCAAACATTTTCCAAGAACAATAATGAACGTCTCCTGAATGGAAGCAATGCGGTGATTGATTATCAGATGTTTAGAAGGGATGGTCCGAAAGTGCAGCCATTTATGGTAGATGTGAAGCACTGCCAGGATGTATTCTCTGAGATGCAGAGAAGAAATGGTTTTGAAGCAATTTCAAGTTTACAGCAGCAGAGCAGGGGAGTGATGGGAATGAATGGTGTTGGAAGACCGGGGATTCTTGTAGGAGGATCGTGCAGTGGTGTCTCAGATCCAGTGGCAGCAATCAAAATGCATTATTCCAATTCTGACAAGTATGGTGGTCAGTCTGGGAGTATTGCAAGAGAAGATGAATCTTGGGGAGGGAAGGGGGACTGA 4875 0.4291 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHREFNRWGPTEFRRPPGHGKQGGWHLFSEDSGHGYAISRSSSDKILEEDSRPSISRGDGKYGRSSRENRGAFAQRDWRGHSWEPSNGTMNLPRRPQDVNNDQRAVDDALAYSSHPHSDFGNSWDQHHLKDQHEKIGSVNGMGTGPRSDRENSLGDWKPLKWTRSGSLSSRGSGFSHSSSSRSMGAADSHEARAELQTKSAAANESHSGEAAACATSSVPSEDTASRKKPRLNWGEGLAKYEKKKVEVPEPSANKDGPVLSASITEPCNFLSTSLVDKSPKVTGFSECASPATPSSVACSSSPGMDDKLFGKTANVDNDVSNFICSPAPLSENNLQRFPFNLEKFDIGSLNNLGSSIIELVKSDDPTSVDSGPMRSNAINKLLIWKADISKVLEMTESEIDLLENELRSLKSESRETCQFPVSLDSQMLGCDEKSCEEHVGVSDQVTRPVPLNIVDDPNMEKVPLSTNLLSIHESVKEEDIDSPGTATSKFVEPPPSIKSVSCGTGGYVSFSRDVDSVPSAAVNCLIPCSARKDVSVCVSSVDGKTSMEVNDSMDILWGTIISSNKESANKASEVFDNLLPKDCCKIGKMETSSDTCNHTFIREKFAEKKRFARFKERVIALKFRALHHLWKEDMRLLSIRKCRPKSHKKNELSVRTTCNGNQKNRSSIRSRFPFPGNHLSLVPTSEMINFTGKLLSESQVKVQRNTLKMPALILDEKEKIISKFVSSNGLVEDPLAIEKERSMINPWTPQEREVFLEKFAAFGKNFRKIASFLDHKTIADCVEFYYKNHKSDCFEKLKKQDVGKLGKSFSAKTDLLASGNKKIRAGSSLLGGYGKVKTSRVEDFIEKSGSFDILGDERETAAAADVLAGICGSLSSEAISSCITSSVDPVEGSRDRKFLKVNPLYKLPMTPDVTQDVDDETCSDESCGEMDPTDWTDDERAAFLQAVSSFGKDFAKIARRVGTRSQEQCKVFFSKGRKCLGLDLMRPISENVGSPVNDDANGGESDTDDACVVETGSVVGTEKSGTKTDEDLPLYGTNTFNDESNPVQARNLSAELNESKGTNGTEVDIEDANLVSDACAIDIDSKQGCDGSEFAACGSVSGQAMSDSTENGKDKANKLGGASIELISVPDTSEPCESNSFVGDRMVVSEVSSDRLGNELERQRVSSPRCLDDRDNKQEADSGGIVDLKSPGHMLSSTVVNASLSSFGNSCSGLSSSTENKHGPLRKASPLSMDDHQASSNSSLQNTVASDIQCEKTASQDRLSSTCDIQVSTDDKPPITGNSSDHVDAGSILQGYPLQAPIKKEINGDMNSSSSATELHLLSQKNEQPDDQTKKLQSSDSDKASRNGDVKLFGKILTNPSSAQKPNVGAKGSEENGTHHPKFSKPSSMKFTGHSADGNVKILKFDCNDYVGLENVPMRSYGYWDGSRIQTGLSSLPDSAILLAKYPAAFSNYPTSSAKLEQPSLQTFSKNNNERLLNGSNAVIDYQMFRRDGPKVQPFMVDVKHCQDVFSEMQRRNGFEAISSLQQQSRGVMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSDKYGGQSGSIAREDESWGGKGD* 1625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 1056 1081 - -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 234 258 - -
Pvu7g0954 1624 SUPERFAMILY Homeodomain-like 968 1017 IPR009057 -
Pvu7g0954 1624 Gene3D - 759 831 - -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 1067 1081 - -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 1247 1284 - -
Pvu7g0954 1624 Pfam Myb-like DNA-binding domain 782 823 IPR001005 -
Pvu7g0954 1624 Pfam Myb-like DNA-binding domain 970 1009 IPR001005 -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 198 221 - -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 8 45 - -
Pvu7g0954 1624 SMART sant 967 1015 IPR001005 -
Pvu7g0954 1624 SMART sant 779 827 IPR001005 -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 1299 1326 - -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 1604 1624 - -
Pvu7g0954 1624 Gene3D - 944 1023 - -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 1299 1325 - -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 1360 1426 - -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 1194 1227 - -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 1 266 - -
Pvu7g0954 1624 ProSiteProfiles SANT domain profile. 969 1009 IPR017884 -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 1393 1407 - -
Pvu7g0954 1624 SUPERFAMILY Homeodomain-like 766 826 IPR009057 -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 156 170 - -
Pvu7g0954 1624 Coils Coil 421 448 - -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 1194 1218 - -
Pvu7g0954 1624 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1600 - -
Pvu7g0954 1624 ProSiteProfiles SANT domain profile. 778 829 IPR017884 -
Pvu7g0954 1624 CDD SANT 971 1009 IPR001005 -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 1360 1385 - -
Pvu7g0954 1624 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1600 - -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 78 112 - -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 117 133 - -
Pvu7g0954 1624 MobiDBLite consensus disorder prediction 1269 1284 - -
Pvu7g0954 1624 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 971 1006 IPR017930 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu7g0954 Myb_DNA-binding 7.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0954 - - pvu:PHAVU_007G093100g 3199.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0954 7 9504490 9512668 Pvu7g0954 7 9504490 9512668 ECH