Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0943 ATGGACTACAAACTCAATACCACAACACCTTCTCCACCAATCCCAATCCCAATCCATGTTCCCTCTATGCTCTCAAACTCTCCTCCATCTTCATCTTCTTCACCTCCCTCACACTCTCCCACACCTTTCCCTTCACCCTCTCCCTCTCCCTCTGCTGCTCCCCCCTCTCCGCCGCCGCCGGTGGTCGTTAGCCCCTGTGCTGCCTGCAAGATCCTCCGCCGCAGGTGCGTCGAGAAGTGTGTCCTGGCTCCATATTTCCCTCCCACTGATCCCCTCAAATTCACCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGGAGCTACCAGAGTCCCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAGGCAAATGCTAGGATCAGAGACCCAGTTTATGGGTGTGCAGGTGCAATATGCCAACTTCAGAAGCAAGTGAGTGAGCTTCAAGCACAGTTGGCGAAAGCACAAGCTGAGCTAGTGAACATGCAGTGCCAACAAGCGAATTTGGTGGCTCTAATTTGCATGGAAATGAGTCAATCGCAGGAGCAGCACGTGGTGCAGCCTCAACCTCTGGTTGACATGAGCTGCTTCATAGAGGACAACACTTTCGGAACTGCTTGGGAGCCTCTTTGGACATGA 657 0.5236 MDYKLNTTTPSPPIPIPIHVPSMLSNSPPSSSSSPPSHSPTPFPSPSPSPSAAPPSPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQCQQANLVALICMEMSQSQEQHVVQPQPLVDMSCFIEDNTFGTAWEPLWT* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0943 218 Pfam Lateral organ boundaries (LOB) domain 65 162 IPR004883 -
Pvu7g0943 218 MobiDBLite consensus disorder prediction 33 57 - -
Pvu7g0943 218 MobiDBLite consensus disorder prediction 1 57 - -
Pvu7g0943 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 51 207 - -
Pvu7g0943 218 ProSiteProfiles LOB domain profile. 64 165 IPR004883 -
Pvu7g0943 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1-LIKE 51 207 - -
Pvu7g0943 218 Coils Coil 144 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0943 Pvu-Chr7 9386914 9388470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0943 61 218 AS2 family AT1G07900 71.779 5.12e-78 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu7g0943 LOB 2.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0943 - - gmx:100806667 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0943 7 9386914 9388470 Pvu7g0943 7 9386914 9388470 ECH