Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0935 ATGTCTGGTAACTCCAATTGCAGTGTTTACATAGGCAATCTAGACGAGAGGGTGACAGACAGGGTCTTGTATGATATATTAATTCAAGCAGGACGAGTGGTAGATTTGCACATTCCTAAAGATAAGGAATCTGAGAAACCGAAAGGTTTTGCCTTTGCTGAATATGAATCTGAGGAGATTGCAGATTATGCTGTCCGACTTTTCTCGGGCCTTGTAACTCTCTACAACAGAACACTCAAGTTTGCGATATCTGGGAGAGACAAAACTACCCTTAATGGCTCTACAGCAAATACCCCCTCATCAAATTCTTCTCAAAGGCCAAGGTCGTATGCAGTCCCAATTAATAATTCAGAAAATTTTCAGCACCCTGCTAGGCTATCAACTTCTGATCGATATTCAGATTATGCAGTAAATTATTCCCAAGTTCCTCCTATTCGTGTAACTGACCAACCTAGTGGGAATGGATCTCACTATAGTGGCAACAATTATGAATACAGCAGGAGAGCTTTTGGGGCAACATTGGATAGCATTAGCCGTAATAGGTTCCGCCGCTTTGATAAAAGTAGCCCTATCCCTTACCCATCTCACTAA 591 0.4179 MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYESEEIADYAVRLFSGLVTLYNRTLKFAISGRDKTTLNGSTANTPSSNSSQRPRSYAVPINNSENFQHPARLSTSDRYSDYAVNYSQVPPIRVTDQPSGNGSHYSGNNYEYSRRAFGATLDSISRNRFRRFDKSSPIPYPSH* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0935 196 MobiDBLite consensus disorder prediction 88 125 - -
Pvu7g0935 196 MobiDBLite consensus disorder prediction 143 162 - -
Pvu7g0935 196 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 80 IPR000504 GO:0003723
Pvu7g0935 196 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 86 IPR000504 GO:0003723
Pvu7g0935 196 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 1 195 - -
Pvu7g0935 196 Gene3D - 2 94 IPR012677 -
Pvu7g0935 196 SUPERFAMILY RNA-binding domain, RBD 4 81 IPR035979 GO:0003676
Pvu7g0935 196 SMART rrm1_1 8 82 IPR000504 GO:0003723
Pvu7g0935 196 PANTHER OS01G0876500 PROTEIN 1 195 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0935 4 97 Eukaryotic Initiation Factors Gene Family AT1G49760 26.596 7.09e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0935 K12831 - gmx:100803118 347.821