Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0933 ATGGGGGAATCCTATGTTGTGGCCAAGAATAACTTGTTTACAACTTGTCCTCAAAAAAGTGAGGATGGTGCCTCTATATCTGCAATGCTGCTTAGTACTACTGTAGTGTACCCTGCAGTTCTGAATGCTGCTATTGAGCTCAACTTGTTTGAGATCATAGCCAAGGCTACAACACCACATGGTTCATTCATGTCATCCCATGAAATTGCTTCTGAGCTCCCAAACCAACACCCTGATTTGCCTAATAGGCTTGATCGCTTGTTGCGTTTGCTTGCTAGTTATTCTCTTCTTACTAGTTCCACTCGCACCACACAACATGGTGCCACTGAGATAGTTTATGGACTCTCACAAGTTGGACAATACTTTGTCCCTGATGCAACTACTGGCAACTTTGCTTCATTTGCAACCTTTCTGTCTTGTCCAGCACTCTCACCAGTTTGGTTGAATTTGAAGGAAGCAGTGATTGATGCAGACGTTGACTTGTTTAAGAAACTTCATGGAGTAACAGCGTACCAGTACATGGAAAAGGATCTAAAAATGAACCAAATTTTTAATAAGTCTATGGCAGACTTGTGTGCAATAGATATGAATAAAATACTTGAAACATATACTTGTTTTGAGGGAATATCAACATTGGTTGATATAGGAGGTGGCAGTGGACAAAATCTCAAAATGATAATCTCCAAATACCCTTCCATTAAAGGAATTAACTTTGATCTGCCCCAAGTGATTGAAAATGCACCATTCCTACCAGGGATTGAGCATGTTGGAGGAGATATGTTTGCAAGAGTTCCACAGGCTGACTCCATGATACTAAAAGCTGTATTGCACAATTGGTCTGATGAAAAGTGCATAGAAATTTTAAGCAATTGTCACAAAGCACTTTTTCCAAATGGGAAGGTGGTTGTTGTGGAGTTCATAATGCCAGAAGAACCAGAAACAACTGAACAATCTCAGCTTGTTTCTTGCCTTGACAACCTTATGTTTATCACAGCTGGTGGAAAGGAAAGAACTCAGAAACAATATGAGAATTTGTGCAAGCTTGCTGGATTTTCAAGTTTTCAAGTTGCATGCCATGCCTCCTCTGGTCCTGGAGTGATGGAATTCTACAAGTAA 1116 0.4032 MGESYVVAKNNLFTTCPQKSEDGASISAMLLSTTVVYPAVLNAAIELNLFEIIAKATTPHGSFMSSHEIASELPNQHPDLPNRLDRLLRLLASYSLLTSSTRTTQHGATEIVYGLSQVGQYFVPDATTGNFASFATFLSCPALSPVWLNLKEAVIDADVDLFKKLHGVTAYQYMEKDLKMNQIFNKSMADLCAIDMNKILETYTCFEGISTLVDIGGGSGQNLKMIISKYPSIKGINFDLPQVIENAPFLPGIEHVGGDMFARVPQADSMILKAVLHNWSDEKCIEILSNCHKALFPNGKVVVVEFIMPEEPETTEQSQLVSCLDNLMFITAGGKERTQKQYENLCKLAGFSSFQVACHASSGPGVMEFYK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0933 371 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 371 - -
Pvu7g0933 371 PANTHER O-METHYLTRANSFERASE 1 371 IPR016461 GO:0008168
Pvu7g0933 371 SUPERFAMILY "Winged helix" DNA-binding domain 22 125 IPR036390 -
Pvu7g0933 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 371 IPR016461 GO:0008168
Pvu7g0933 371 Gene3D - 6 122 IPR036388 -
Pvu7g0933 371 PIRSF O-mtase 6 371 IPR016461 GO:0008168
Pvu7g0933 371 Gene3D Vaccinia Virus protein VP39 124 371 IPR029063 -
Pvu7g0933 371 Pfam O-methyltransferase domain 147 352 IPR001077 GO:0008171
Pvu7g0933 371 CDD AdoMet_MTases 211 308 - -
Pvu7g0933 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 360 IPR029063 -
Pvu7g0933 371 Pfam Dimerisation domain 40 92 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0933 Pvu-Chr7 9256585 9258273 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0933 18 360 Monolignol Biosynthesis Gene Families AT5G54160 45.349 3.23e-106 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0933 - - gmx:100787536 541.962