LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu7g0933	ATGGGGGAATCCTATGTTGTGGCCAAGAATAACTTGTTTACAACTTGTCCTCAAAAAAGTGAGGATGGTGCCTCTATATCTGCAATGCTGCTTAGTACTACTGTAGTGTACCCTGCAGTTCTGAATGCTGCTATTGAGCTCAACTTGTTTGAGATCATAGCCAAGGCTACAACACCACATGGTTCATTCATGTCATCCCATGAAATTGCTTCTGAGCTCCCAAACCAACACCCTGATTTGCCTAATAGGCTTGATCGCTTGTTGCGTTTGCTTGCTAGTTATTCTCTTCTTACTAGTTCCACTCGCACCACACAACATGGTGCCACTGAGATAGTTTATGGACTCTCACAAGTTGGACAATACTTTGTCCCTGATGCAACTACTGGCAACTTTGCTTCATTTGCAACCTTTCTGTCTTGTCCAGCACTCTCACCAGTTTGGTTGAATTTGAAGGAAGCAGTGATTGATGCAGACGTTGACTTGTTTAAGAAACTTCATGGAGTAACAGCGTACCAGTACATGGAAAAGGATCTAAAAATGAACCAAATTTTTAATAAGTCTATGGCAGACTTGTGTGCAATAGATATGAATAAAATACTTGAAACATATACTTGTTTTGAGGGAATATCAACATTGGTTGATATAGGAGGTGGCAGTGGACAAAATCTCAAAATGATAATCTCCAAATACCCTTCCATTAAAGGAATTAACTTTGATCTGCCCCAAGTGATTGAAAATGCACCATTCCTACCAGGGATTGAGCATGTTGGAGGAGATATGTTTGCAAGAGTTCCACAGGCTGACTCCATGATACTAAAAGCTGTATTGCACAATTGGTCTGATGAAAAGTGCATAGAAATTTTAAGCAATTGTCACAAAGCACTTTTTCCAAATGGGAAGGTGGTTGTTGTGGAGTTCATAATGCCAGAAGAACCAGAAACAACTGAACAATCTCAGCTTGTTTCTTGCCTTGACAACCTTATGTTTATCACAGCTGGTGGAAAGGAAAGAACTCAGAAACAATATGAGAATTTGTGCAAGCTTGCTGGATTTTCAAGTTTTCAAGTTGCATGCCATGCCTCCTCTGGTCCTGGAGTGATGGAATTCTACAAGTAA	1116	0.4032	MGESYVVAKNNLFTTCPQKSEDGASISAMLLSTTVVYPAVLNAAIELNLFEIIAKATTPHGSFMSSHEIASELPNQHPDLPNRLDRLLRLLASYSLLTSSTRTTQHGATEIVYGLSQVGQYFVPDATTGNFASFATFLSCPALSPVWLNLKEAVIDADVDLFKKLHGVTAYQYMEKDLKMNQIFNKSMADLCAIDMNKILETYTCFEGISTLVDIGGGSGQNLKMIISKYPSIKGINFDLPQVIENAPFLPGIEHVGGDMFARVPQADSMILKAVLHNWSDEKCIEILSNCHKALFPNGKVVVVEFIMPEEPETTEQSQLVSCLDNLMFITAGGKERTQKQYENLCKLAGFSSFQVACHASSGPGVMEFYK*	372

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu7g0933	371	PANTHER	CAFFEIC ACID O-METHYLTRANSFERASE	1	371	-	-
	Pvu7g0933	371	PANTHER	O-METHYLTRANSFERASE	1	371	IPR016461	GO:0008168
	Pvu7g0933	371	SUPERFAMILY	"Winged helix" DNA-binding domain	22	125	IPR036390	-
	Pvu7g0933	371	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	29	371	IPR016461	GO:0008168
	Pvu7g0933	371	Gene3D	-	6	122	IPR036388	-
	Pvu7g0933	371	PIRSF	O-mtase	6	371	IPR016461	GO:0008168
	Pvu7g0933	371	Gene3D	Vaccinia Virus protein VP39	124	371	IPR029063	-
	Pvu7g0933	371	Pfam	O-methyltransferase domain	147	352	IPR001077	GO:0008171
	Pvu7g0933	371	CDD	AdoMet_MTases	211	308	-	-
	Pvu7g0933	371	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	135	360	IPR029063	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu7g0933	Pvu-Chr7	9256585	9258273	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu7g0933	18	360	Monolignol Biosynthesis Gene Families	AT5G54160	45.349	3.23e-106	315

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu7g0933	-		-	gmx:100787536	541.962

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