Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0932 ATGAAGGACGCTTTGCGAATATTTTCTGAAATGAAAGACTCTGCACTTCTTCCTGATGTTGTAACTTTCAACACATTTATTGCAACTTATGCTGCTGACTCGATGTTTGCTGAAGCTATTGATGTAGTTCGATACATGATCAAGCAGGGATGTAAACCAGACCAGAATACTTATAACTCCATTGTTGATTGGTATTGTAAGCTCAAACGTCGGGATGAGGCCAACAGTTTTGTTAAAAGCCTTCGTGATCTTGACCCACATGTTTCTAAGGAGGAGGAAAGTAGGTTACTTGAGAGAATACATATCAAGGCAATTATCACCGCTCAAGAGGTATTGTTGAGAGATCCAACAGATGAAAATGTGATCCCTATTGTCGAGGAACTGCAAAGGCGGTTGCCTCAATTAAGTGTCGGTCTTCAACAGCAAGAAGATGGTAAAGAGTATCTTGGTGGCCAACATGATACTGAAACAGCTGCAGAGGATGAGTCACTCTTTGAATTTCGGGCCCTGGAAGTTGCTTTAGAAGCCATTGGCAGTTTTCTTGCTGCACGTGCAACAGAATTGGAGATGGCTGCTTATCCTGCATTAGATGAACTTACCTCCAAGATTAGTAGTCGGAATTTGGATAGAGTTCGAAAACTGAAGAGTGCAATGACAAGATTGACAGCTAGAGTACAAAAGGTCAGAGATGAGCTTGAACAATTGCTGGATGATGATGATGATATGGCTGATCTATACCTGTCAAGAAAAACAGGTTCCTCATCACCAGCCAGTGGAACAGGTGCTGCAAATTGGTTTGCTGCCTCCCCCACCTTAGGATCAAGGACATCTAGGGCAAGTAGGGCAAGTCTAGCAACAGTTTGTTTAGATGAAAATGATGTGGAAGAGCTTGAAATGTTACTTGAGGCTTATTTTAGTGAAATTGATCATACGTTGAACAAATTAACCACGTGTTCATACGTTGAACAAATTAACCACAGAGCATTTTCTGCTTTGATGTTTGTCATGATAACAGCCTATGCTTGCAAAAAGGGATTAGTTGGATTTTAG 1050 0.4114 MKDALRIFSEMKDSALLPDVVTFNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLKRRDEANSFVKSLRDLDPHVSKEEESRLLERIHIKAIITAQEVLLRDPTDENVIPIVEELQRRLPQLSVGLQQQEDGKEYLGGQHDTETAAEDESLFEFRALEVALEAIGSFLAARATELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKTGSSSPASGTGAANWFAASPTLGSRTSRASRASLATVCLDENDVEELEMLLEAYFSEIDHTLNKLTTCSYVEQINHRAFSALMFVMITAYACKKGLVGF* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0932 349 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 79 320 IPR039204 -
Pvu7g0932 349 Gene3D Tetratricopeptide repeat domain 1 88 IPR011990 GO:0005515
Pvu7g0932 349 Coils Coil 211 238 - -
Pvu7g0932 349 Gene3D Magnesium transport protein CorA, transmembrane region 123 327 - -
Pvu7g0932 349 TIGRFAM PPR: pentatricopeptide repeat domain 21 54 IPR002885 -
Pvu7g0932 349 TIGRFAM PPR: pentatricopeptide repeat domain 57 83 IPR002885 -
Pvu7g0932 349 Pfam PPR repeat family 18 67 IPR002885 -
Pvu7g0932 349 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 19 53 IPR002885 -
Pvu7g0932 349 PANTHER MAGNESIUM TRANSPORTER MRS2-I 79 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0932 Pvu-Chr7 9202631 9205504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0932 79 316 MRS2 Gene Family AT5G09690 65.447 2.19e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0932 K16075 - gmx:100810239 343.969