Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0930 ATGGAAGATTCAGAGGAGGATGAGCTTTTGAATCTTAGCCTTTCAGTTGCTGCAGATAGGGAAAAGAAAAAGAAGGGAAAGATAATTAGGGAACATAGCGTCTCTATGAGTAGTACTACTGGTAGGAAGTCCTATGAAAGGTATGAAGGGAAGATATTTAGGCTTCTTGAAATGAGGGAGCAGATGGTAAGAGAAGAGCATAGGAGGAAAGGAGTTGTGGAAGATGGGAATGGCCTCCCCTTGATCCATTTGCTGCTCTCAACTGCCACTGCTGTTGATGACAACAACTTGGATTCATCCTTAGAGAATCTCACTGATTTATACCAAACTGTTTCCCTAACAGGTGACTCGGTTCAGCGTGTGGTGGCTTATTTTGCTGATGGTTTGGCCGCAAGGCTTCTCACAAGGAAATCTCCATTCTTCGACGTGCTCATGGAGGACCCAACAACTGAGGAAGAGTTCCTTGCATTCACGGATCTCTACAGGGTTTCACCTTACTTCCAATTCGCTCATTTCACAGCAAACCAAGCTATTTTGGAGGCCTTTGAGAGAGAGGAAGAGAGGAACAACCGCGCTTTGCATGTCATTGACTTTGATGTCTCCTATGGCTTCCAATGGCCCTCTCTCATTCAGTCTCTCTCAGAGAAGGCAACCACTGGCAACCGCATATCCCTCAGGATAACCGGATTTGGGAAGAATCTCAAAGAGCTTCAAGAAACTGAGTCTAGATTGGTTAGTTTCTCAAAGGGTTTTGGCAGTCTGGTGTTTGAATTCCAAGGGCTGCTACGAGGCTCAAGGGTGATCAACCTAAGGAAGAAAAAAAATGAAACGGTGGCCGTCAACTTAGTTTCTTATTTGAACACTTTGAGTTGTTTCATGAAGATCTCTGACACATTGGGATTTGTTCATTCCCTTCATCCCTCCATTGTTGTTCTGGTGGAGCAAGAGGGTAGCAGGAGTCCTAGGAGCTTCTTGTCAAGGTTCACAGACTCCTTGCACTACTTTGCAGCCATGTTTGATTCACTGGATGATTGCCTCCCACTAGATAGTGCTGAGAGGTTCAGAATTGAGAAGAAGCTTCTGGGGAAAGAAATCAAAAGCTTGCTCAACAGTGATGTGGATGGTGTGGATTGCCCAAAATATGAGAGGATGGAAACATGGAAAGCAAGAATGGAGAATCATGGGTTTGTTGCCACCAAAATAAGCTCAAAGTCTATGATCCAAGCAAAACTATTGCTGAAGATGAGGACACATTATTGTCCTCTTCAGTTTGAGGAAGAAGGAGGTGGAGGTTTCAGGGTTTCTGAAAGAGATGAAGGAAGGGCTATCTCTTTAGGGTGGCAAAATAGGTTTCTGTTGACAGTCTCAGCATGGCAATCAGTCTGA 1386 0.4452 MEDSEEDELLNLSLSVAADREKKKKGKIIREHSVSMSSTTGRKSYERYEGKIFRLLEMREQMVREEHRRKGVVEDGNGLPLIHLLLSTATAVDDNNLDSSLENLTDLYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFFDVLMEDPTTEEEFLAFTDLYRVSPYFQFAHFTANQAILEAFEREEERNNRALHVIDFDVSYGFQWPSLIQSLSEKATTGNRISLRITGFGKNLKELQETESRLVSFSKGFGSLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFMKISDTLGFVHSLHPSIVVLVEQEGSRSPRSFLSRFTDSLHYFAAMFDSLDDCLPLDSAERFRIEKKLLGKEIKSLLNSDVDGVDCPKYERMETWKARMENHGFVATKISSKSMIQAKLLLKMRTHYCPLQFEEEGGGGFRVSERDEGRAISLGWQNRFLLTVSAWQSV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0930 461 Pfam GRAS domain family 81 459 IPR005202 -
Pvu7g0930 461 PANTHER OSJNBA0084A10.13 PROTEIN 8 459 - -
Pvu7g0930 461 ProSiteProfiles GRAS family profile. 72 459 IPR005202 -
Pvu7g0930 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 459 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0930 Pvu-Chr7 9184617 9186002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0930 77 459 GRAS Transcription Factor Family AT1G14920 34.336 1.79e-54 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu7g0930 GRAS 1.2e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0930 - - gmx:100809458 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0905 4 15408089 15409480 Pvu7g0930 7 9184617 9186002 PCT