Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0919 ATGACATTAACCCAAATTCCTGAGAGATCATCAGTTGATATGGAATCATGCGTGCCTCCAGGGTTTAGATTTCATCCAACGGAAGAGGAGCTTGTGGGCTACTATCTCAAGAGGAAGATAAACTCCCTGAAAATCGATCTTGATGTTATTGTTGAGATTGATCTGTACAAAATGGAACCATGGGACATACAAGATAGGTGCAAGCTAGGATATGAGCAACAAAATGAATGGTACTTTTTCAGCCATAAAGATAAGAAGTATCCTACAGGAACAAGAACTAACAGGGCCACTGCTGCTGGATTCTGGAAAGCAACTGGAAGGGACAAGGCTGTCATGTCCAAAAATAGAATCATAGGAATGAGGAAGACCTTGGTCTTCTACAAGGGACGTGCCCCTAATGGAAGGAAAACAGACTGGATTATGCATGAATATAGGCATCAAACCTCTGAACATGGTCCTCCACAGGAAGAAGGATGGGTTGTGTGCCGAGCATTTCGGAAGCCTAGTCCAAGTCACAGGCAAGGTTATGAGGCATGGTGCAGTAGTAGTAGCCATCAACAGTTTCTCAGAGATCAAAGCTTTGCAAGACCCTTATCAATTGCTGATATTTTGAATGAAACAAATGTGCCTCATCATCATCACCCTGCTGAAGCTCCAAGTTTTAGTCTTCCTTTTGGCTCAGATCAGCAACCCTTTATTCTGCCAAACCAAACTGTTATGGACAAACAGCTGATTGAGCTTCCTCAGCTAGACAGTCCAACTGCAAGTTTTGCAATGAAGGAATGTAACCAACAACACCACAATGGCCTCACAAATGAGGAATATTGTAGTGATGAAAGGAGCAATAGCAGTGCTCAAGGTATCGATTGGAAGAGTTTGGACAACTTGTTCGGATCACAGTTGAGTGAGACAGCTTATTTTTCACATCCAAACGTGGCCTTGATGATGCCCCATAATAACCATGATCAAGCTAGTCATATCCTAGGATGCTTCCCAGATTCATAG 1005 0.4289 MTLTQIPERSSVDMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQEEGWVVCRAFRKPSPSHRQGYEAWCSSSSHQQFLRDQSFARPLSIADILNETNVPHHHHPAEAPSFSLPFGSDQQPFILPNQTVMDKQLIELPQLDSPTASFAMKECNQQHHNGLTNEEYCSDERSNSSAQGIDWKSLDNLFGSQLSETAYFSHPNVALMMPHNNHDQASHILGCFPDS* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0919 334 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Pvu7g0919 334 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
Pvu7g0919 334 SUPERFAMILY NAC domain 14 167 IPR036093 GO:0003677|GO:0006355
Pvu7g0919 334 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 16 315 - -
Pvu7g0919 334 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 315 - -
Pvu7g0919 334 ProSiteProfiles NAC domain profile. 18 167 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0919 Pvu-Chr7 9084885 9089353 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0919 14 334 NAC Transcription Factor Family AT1G71930 54.734 2.30e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu7g0919 NAM 8.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0919 - - var:108325420 651.358