Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0916 ATGAATATAGGTTCGAAAATGGTGATTGCTGCATATAAAAGTTTTAGAATTGATTTTGGTTTTCGACCTTATTCAAAGAACAGTAATTATAGGGTAGACAGTTGTTACAAGACACTAAAAATGTGGCATGGTGATCGTGGGAAATCAGTTGCTACTAGAGCATGTACGAAGGAGTGTTGGAGATTGTCGGAGAGTGGCAAAATGTCGAAAGATTGGAGCGCATCAAAGAGCAAAAACGTGTTGCCGCACGAGACCCCGGACCTGAAGGAGCACTACGTTGTGGGGCAGAAGGTGCTGGGAAAAGGGCACTTGGCCACCACCTACCTCTGCACCCACAAGGAGACAAGGAAGAGTTACGCCTGCAAAACCATCCCAAAGGCCAAGCTCTTGTGCCAAGAGGAGTGTGATGATGTGTGGAGGGAGATTCAGATCATGCACCATTTGTCGGAGCAACCCAATGTGGCAAGGATACAGGGAATCTATGAGGACAAGTTTGCGGTGCACCTTGTGATGGAGCTGTGTCGTGGGGGTGAGCTTTTCTATAGGATCACTCAGAAGGGGCATTACAGCGAACGTGAGGCTGCCAAGTTGATGAAGACCATTGTTGGGGTGGTCGAAGGGTGCCACGCTCTTGGGGTCATCCATAGGGATCTTAAACCTGAAAATTTCTTGTTTGATACCCCTGCCAGTAAGGCCACCCTCAAGGTCATCGATTTTGGCTTCTCTGTCTTCTTTAAACCAGGACAAACCTTTAGTGATATAGTAGGAACTTGCTACTATATGGCCCCAGAGGTGTTGTGCAAACAATCTGGACCAGAAGTGGACGTTTGGAGTGCTGGTGTTATTCTGTACATCTTACTGAGAGGGCTCCCACCTTTCTGGGCAAAATCCGAATCAGGAGTCTACAAACAGATTTTGCATGAAGAGGTTGATTTTGCATCTAATCCGTGGCCAAGTATATCAGGAAGTGCTAAAGATTTGATAAAACAGATGTTGGATAAAGACCCTAAGAAAAGAATTTCTGCTCATGAAGTCTTGTGTCACCCTTGGATTGTTGATGATAGTGTTGCCCCGGACAAACCTCTGGATCCTGCTGTTTTGACACGCCTAAAGCATTTCTCAACAATGAATAAACTGAAGAAGATGGCATTACGTGTCATAGTAGAAAGACTTTCAGAAGAGGAAATAGGTGGATTAAAAGAGTTATTTAGAATGATTGACGAAGACAATAGTGGGACAATCACTTTTCAGGAACTCAAAGATGGTTTGAAAAGTGTGGGATGTGATCTCATGGAATCTGAAATTAAATCCCTTATGGAGGCGGCTGATATAGACAGCAATGGGACAATAGACTATGGTGAATTTCTCGCAGCTACACTACACTTGAATAAGATGGAAAGAGAAGAAAATTTGGTTGCTGCTTTTTCCTATTTTGATAGAGATGGTAGTGGTTATATAACCATTGATGAGCTTCAACAGGCTTGTAACGACTTCGGTCTTGGTGTTTTGCATCTGGATGAGATGATCAAAGAGATTGATCAAGACAATGATGGGAGAATTAATTATGGGGAGTTTACAACAATGATGAGAAGGGGCGAACCAGGTAGAAACAGAACCATGAACAGCAATGTTAGCACTTCATTATTGCACGAGTTAGGACTGAAAGACTCATCCTAA 1677 0.4347 MNIGSKMVIAAYKSFRIDFGFRPYSKNSNYRVDSCYKTLKMWHGDRGKSVATRACTKECWRLSESGKMSKDWSASKSKNVLPHETPDLKEHYVVGQKVLGKGHLATTYLCTHKETRKSYACKTIPKAKLLCQEECDDVWREIQIMHHLSEQPNVARIQGIYEDKFAVHLVMELCRGGELFYRITQKGHYSEREAAKLMKTIVGVVEGCHALGVIHRDLKPENFLFDTPASKATLKVIDFGFSVFFKPGQTFSDIVGTCYYMAPEVLCKQSGPEVDVWSAGVILYILLRGLPPFWAKSESGVYKQILHEEVDFASNPWPSISGSAKDLIKQMLDKDPKKRISAHEVLCHPWIVDDSVAPDKPLDPAVLTRLKHFSTMNKLKKMALRVIVERLSEEEIGGLKELFRMIDEDNSGTITFQELKDGLKSVGCDLMESEIKSLMEAADIDSNGTIDYGEFLAATLHLNKMEREENLVAAFSYFDRDGSGYITIDELQQACNDFGLGVLHLDEMIKEIDQDNDGRINYGEFTTMMRRGEPGRNRTMNSNVSTSLLHELGLKDSS* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0916 558 ProSitePatterns EF-hand calcium-binding domain. 513 525 IPR018247 -
Pvu7g0916 558 Gene3D - 359 532 - -
Pvu7g0916 558 ProSitePatterns EF-hand calcium-binding domain. 479 491 IPR018247 -
Pvu7g0916 558 CDD STKc_CAMK 91 350 - -
Pvu7g0916 558 ProSiteProfiles EF-hand calcium-binding domain profile. 430 465 IPR002048 GO:0005509
Pvu7g0916 558 Pfam Protein kinase domain 96 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0916 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Pvu7g0916 558 ProSitePatterns EF-hand calcium-binding domain. 443 455 IPR018247 -
Pvu7g0916 558 PANTHER BNAA09G05220D PROTEIN 73 543 - -
Pvu7g0916 558 SUPERFAMILY Protein kinase-like (PK-like) 74 376 IPR011009 -
Pvu7g0916 558 ProSitePatterns EF-hand calcium-binding domain. 407 419 IPR018247 -
Pvu7g0916 558 CDD EFh 399 458 IPR002048 GO:0005509
Pvu7g0916 558 ProSiteProfiles EF-hand calcium-binding domain profile. 394 429 IPR002048 GO:0005509
Pvu7g0916 558 ProSiteProfiles EF-hand calcium-binding domain profile. 466 501 IPR002048 GO:0005509
Pvu7g0916 558 PANTHER SERINE/THREONINE-PROTEIN KINASE 73 543 - -
Pvu7g0916 558 SMART serkin_6 93 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0916 558 Gene3D Transferase(Phosphotransferase) domain 1 179 358 - -
Pvu7g0916 558 ProSiteProfiles Protein kinase domain profile. 93 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0916 558 Pfam EF-hand domain pair 469 530 IPR002048 GO:0005509
Pvu7g0916 558 Pfam EF-hand domain pair 399 459 IPR002048 GO:0005509
Pvu7g0916 558 CDD EFh 471 530 IPR002048 GO:0005509
Pvu7g0916 558 SMART efh_1 434 462 IPR002048 GO:0005509
Pvu7g0916 558 SMART efh_1 398 426 IPR002048 GO:0005509
Pvu7g0916 558 SMART efh_1 504 532 IPR002048 GO:0005509
Pvu7g0916 558 SMART efh_1 470 498 IPR002048 GO:0005509
Pvu7g0916 558 SUPERFAMILY EF-hand 390 530 IPR011992 -
Pvu7g0916 558 Gene3D Phosphorylase Kinase; domain 1 94 178 - -
Pvu7g0916 558 ProSiteProfiles EF-hand calcium-binding domain profile. 504 535 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0916 Pvu-Chr7 9052511 9061441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0916 68 558 EF-hand Containing Proteins AT4G09570 69.715 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu7g0916 Pkinase 6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0916 K13412 - gmx:100811596 838.18