Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0879 ATGGGTGAAGCTTCGGGAGATGGCAACGCTGACTGTTTCAGCCAGATGATGGCGTCGATGCCTGGTTTTCGCTTCCATCCCACGGATGAAGAGTTGGTTATGTACTATCTGAAGCGGAAGATTTGTGGGAAGAGGCTGAAGCTCAACGTTATTCGTGAAACCGATGTGTATAGGTGGGATCCTGAGGAGTTGCCAGGGCAATCCATACTGAAAACTGGAGATAGGCAATGGTTCTTTTTCTGTCCCAGAGATAGGAAGTATCCTAACGGTGCAAGGTCTAATCGAGCCACCAGACATGGTTACTGGAAGGCCACAGGAAGGGATCGTAATGTGATATGCAATTCTAGGGCAGTTGGAGTGAAAAAAACCCTGGTTTTCTATATAGGCAGAGCTCCTAGTGGCACGCGAACGGATTGGGTTATGCATGAATACACCATGGACGAAGAGGAGCTTAAGAGATGCCAGGGTGTTAAGGAATATTATGCACTTTATAAGGTTTTCAAGAAAAGTGGAGCTGGTCCTAAAAATGGTGAACAGTATGGTGCACCATTTAGTGAACAAGAGTGGGCAGCGGATGATGACATAGTGGATTTTAATATTAAGATAACTGATCAGGAGGCTCCAAATGTTGTCTCTGAGAATGGGAATGTACTGCATCCGTTGCTTGATGATGAAATCAACGACATCATTAGAGAAATTTTGGATGATGAGCTTGTCCTTGATCAGCAGCATGTGAATGGTTTTCTTGACTTTCCTCAGGTTGTTACTGAAGAAACACAAAGTACTGTTGTCGATCAGTTCTCTGAGGCGGTTATGTTCCCTGAGACAATCAATTCTTGCTGTGAATTTTTTGATGTGCAGCCCAGCTTTGAGTTCAACCAGCCAGTTACTTCTCATTTACAAGTTTCTGAAGCTTCTGAGGTTTCTTCTGCCTCCAACGTTAAAACAAAGGGGCTTGATTTGGATGAGGATGGCTTTTTGGAAATTAATGATCTCATTGATACTGAACCTACATTGGCAAATGTGGAAAATCCCGTGGAGCACCTGCGGTTTGAAGATGGGTTAAGTGAACTTGATCTATACCAAGATGCAGAGATGTTTCTTCGTGACCTGGGGGCAAATGAATATACAAATGCCCTTGTCAGCAACAATATCGAAAGTCAAACTTACCAGTTGCTATGCAATCCAGAGGATGCCAACCAAACTGTTGGTGAATTCTGGATTCATGGTGAAAGAAACACCCTGAGTCCATCAGAAGAAGGCTTTGTTGATTCTTTCTCGCTACCATCCGCAGGTGTTGTATGTGAATCTCTCAGTTTTCCTGAGGAAGGCAATTACAATCAAAGTAGCACCGTGGAAGACGTTTCTACAAGTAGCTTCTCCTCTTCTCTCTGGGCCTTTGTTGAGTCAATACCTACTACTCCTGCATCAGCTGCTGAAAGTGCTTTGGTGAATCGAGCATTGAATCGAATGTCTAGCTTCAGCCGGGTAAAGATCAGGCACACAAACATTGCTGCAGGTAAAGAAACTGCAACTACGAAGAAAGCAGGCAGAAAGGGATTTTCATTCCTTTTCTTCCCTATTCTTATTGCTTTATGTGCTTTTTTGTGGGTTTTTGTTGGAAGCTTGAGATTATTAGGGAGATGTATCTCTCCTTGA 1659 0.4352 MGEASGDGNADCFSQMMASMPGFRFHPTDEELVMYYLKRKICGKRLKLNVIRETDVYRWDPEELPGQSILKTGDRQWFFFCPRDRKYPNGARSNRATRHGYWKATGRDRNVICNSRAVGVKKTLVFYIGRAPSGTRTDWVMHEYTMDEEELKRCQGVKEYYALYKVFKKSGAGPKNGEQYGAPFSEQEWAADDDIVDFNIKITDQEAPNVVSENGNVLHPLLDDEINDIIREILDDELVLDQQHVNGFLDFPQVVTEETQSTVVDQFSEAVMFPETINSCCEFFDVQPSFEFNQPVTSHLQVSEASEVSSASNVKTKGLDLDEDGFLEINDLIDTEPTLANVENPVEHLRFEDGLSELDLYQDAEMFLRDLGANEYTNALVSNNIESQTYQLLCNPEDANQTVGEFWIHGERNTLSPSEEGFVDSFSLPSAGVVCESLSFPEEGNYNQSSTVEDVSTSSFSSSLWAFVESIPTTPASAAESALVNRALNRMSSFSRVKIRHTNIAAGKETATTKKAGRKGFSFLFFPILIALCAFLWVFVGSLRLLGRCISP* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0879 552 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Pvu7g0879 552 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Pvu7g0879 552 Gene3D NAC domain 28 172 IPR036093 GO:0003677|GO:0006355
Pvu7g0879 552 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 19 551 - -
Pvu7g0879 552 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Pvu7g0879 552 PANTHER NAC TRANSCRIPTION FACTORS 2 19 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0879 Pvu-Chr7 8519048 8523068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0879 1 550 NAC Transcription Factor Family AT1G34190 45.347 5.95e-138 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu7g0879 NAM 5.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0879 - - gmx:100794925 889.026