Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0852 ATGGGCTGTGTTCAGGCCAAGCCATTGGATTCGGAAGGTCCAGACTACAGGAGCCTGGAGAGGTTGAAGTTGGATAATGGGTATGTCGCAAGTTCTGACTTTGTTGCTCATAGGAGATCCACTGGTCAAAGACATGACCCCAATAAGGACCATCACAGGCTGCATCAGCCTCAGAGAGAACAACCCATAAAGCATAAACTTAAGTCTGGTGTTGCCAATGATGGCGCTGGGCATCATAAGGGCAGGGTGGTTGGAAGAGAGGGGAAGCGAGTCACGCGTCGTGATGATAAGAAATTGGCAAACAAGTGTTGCTTTGAGGATGAGATGGTAGATGGGTGGCCAAGGTGGTTGGTTGATAATGTTCCTGCACAAGTGTTGGCTGGCTTGGTTCCTAGGAGTGCTGAATCCTACAAAATGATTGATAAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCTCTGGATAGAGACACAGGAGAAATTGTGGCCATGAAGAAGGTTCGCTTCAATACATCAGAACCTGAAAGCATAAAGTTTATGGCAAGAGAAATTACGATATTACAGAGACTGGATCATCCCAATGTAGTTAAACTTAAAGGATTAGCCACTTCAAGAATGCAGTACAGTATATATCTAGTTTTTGACTTCATGCAAACAGATTTGGCACGAGTTATTGCTCGTCCTGAAGAGAGACTATCAGAACCACAGGTCAAGTGCTATATGCATCAATTACTTTCAGGTCTGCAGCATTGCCATGACAGGGGAATTCTTCATCGAGATATAAAGGGGTCAAACCTTTTGATTGATAAAACTGGGATGCTTAAGATTGCCGATTTTGGACTTGCCAATTTTTATGGTCCAGATCATCATCAGCCTCTCACTAGCCGGGTTGTGACACTATGGTACAGAGCTCCTGAATTGTTGTTAGGAGACACAAACTATGGAGTTGGTGTTGATCTGTGGAGTGCTGGATGTCTCCTGGCAGAAATGTTCAAAGGATTACCAATCATGCCTGGCAGAACTGAGGTTGAGCAAATTCATAAAATTTTCAGGCTATGTGGCACACCATCAGAGGAGTATTGGAGAAAATTGAAACTTTCTATAACTTTTAGACCTCCAAAGTCTTATAGACCCAGCCTTGTAGAAACTTTCGGGGATCTCCCTCCATCTTCTTTAGGTCTTTTATGCACTTTGCTTGCTTTGGATCCCGCATTCCGTGGAACTGCATCTAAAGCTCTTAAAAATCAGTTTTTCTTTACAAGCCCATTGGCATGTGACCTCTCTGGTATGCCTGTAATCTTCAGAGAGGATGATGAGCGTGTTCAAGCCAACGAACAGATCAAGTACATGAACTCTAAAATCAGGCGTTCTCGGACATATCTGGAGCGTCGTAAGAATTCAGTATCTAAGAGGCCAATAGAGCATACTGTATCTTCTAAAGAGGAATTGGTAAGGAATGCTAAACCTGAAACTTTTGCTCCAACTGAAGACATGGATAGCACAAGCAGTACCTCATCTAGTGTAAATCCTGGAGGGGCTAAGGACCAATCACCTTTTTTTCTATCTCCATTTGGGGAATTAGATCGAAAGCTATCTCCAAAACCTCACCACCATGTTAATGTTGGTGAAGAAAACATCAAGAACCTTCCTCCATTGCCCAAGTCAAAACCAAATGCTACCAAGAATGATGTCAGTAGATACAGACCAGACCAGTTTTTTAGGTCAGCTTCCACCAGAGAATTTAGATACTTAAAAAGGGAGGAGCGTTTACTATTGGAATTTGATGATTAA 1794 0.4281 MGCVQAKPLDSEGPDYRSLERLKLDNGYVASSDFVAHRRSTGQRHDPNKDHHRLHQPQREQPIKHKLKSGVANDGAGHHKGRVVGREGKRVTRRDDKKLANKCCFEDEMVDGWPRWLVDNVPAQVLAGLVPRSAESYKMIDKVGQGTYSNVYKALDRDTGEIVAMKKVRFNTSEPESIKFMAREITILQRLDHPNVVKLKGLATSRMQYSIYLVFDFMQTDLARVIARPEERLSEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKTGMLKIADFGLANFYGPDHHQPLTSRVVTLWYRAPELLLGDTNYGVGVDLWSAGCLLAEMFKGLPIMPGRTEVEQIHKIFRLCGTPSEEYWRKLKLSITFRPPKSYRPSLVETFGDLPPSSLGLLCTLLALDPAFRGTASKALKNQFFFTSPLACDLSGMPVIFREDDERVQANEQIKYMNSKIRRSRTYLERRKNSVSKRPIEHTVSSKEELVRNAKPETFAPTEDMDSTSSTSSSVNPGGAKDQSPFFLSPFGELDRKLSPKPHHHVNVGEENIKNLPPLPKSKPNATKNDVSRYRPDQFFRSASTREFRYLKREERLLLEFDD* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0852 597 MobiDBLite consensus disorder prediction 38 90 - -
Pvu7g0852 597 MobiDBLite consensus disorder prediction 464 488 - -
Pvu7g0852 597 ProSitePatterns Protein kinases ATP-binding region signature. 143 166 IPR017441 GO:0005524
Pvu7g0852 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Pvu7g0852 597 MobiDBLite consensus disorder prediction 464 519 - -
Pvu7g0852 597 Gene3D Transferase(Phosphotransferase) domain 1 220 466 - -
Pvu7g0852 597 SUPERFAMILY Protein kinase-like (PK-like) 132 423 IPR011009 -
Pvu7g0852 597 Pfam Protein kinase domain 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0852 597 Gene3D Phosphorylase Kinase; domain 1 127 219 - -
Pvu7g0852 597 MobiDBLite consensus disorder prediction 496 514 - -
Pvu7g0852 597 MobiDBLite consensus disorder prediction 544 567 - -
Pvu7g0852 597 SMART serkin_6 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0852 597 PANTHER CYCLIN-DEPENDENT KINASE 1 563 - -
Pvu7g0852 597 PANTHER CELL DIVISION PROTEIN KINASE 1 563 - -
Pvu7g0852 597 ProSiteProfiles Protein kinase domain profile. 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0852 Pvu-Chr7 8168881 8173705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0852 132 433 Core Cell Cycle Gene Families AT5G10270 45.938 1.44e-90 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pvu7g0852 Pkinase 6.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0852 K08819 - gmx:100776854 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1190 4 36906152 36913729 Pvu7g0852 7 8168881 8173705 ECH
Pvu7g0852 7 8168881 8173705 Pvu7g0852 7 8168881 8173705 ECH