Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0848 ATGGACAACGCTTTCCAAGCCATCGTCGCCGCCATAGGCAGCTTCTTCATCGTCTCGCTACTCCTTGTCGGAGCCATCATGCTCTGCCAGCAGTACCGCAACTCCTCCAAAGCCCGCACCCGCCACAGATCAACCACACCCGCGCCCACCCGCGACGCCTCTTTCTCTCTCGCCGTTGTCGACGCCAGCTGGTCCTCCGACCCCAACCTCATCAAGATCACGTGGGAGGAGCTCGCCGTCGCCACCGAAAACTTCTCCCCGCACCTCATCGTCGGCGACGGCAGCTTCGGCCTTGTCTACAAGGCCCGCCTCTCCACCAACGCCCTCGTCGCCGTCAAGAAGCTCTCCCCCGACGCCTTCCAGGGCTTCCGCGAGTTCAGGGCGGAGATGGAAACCCTAAGCAAGCTCAACCACCCAAACATCGTCAGAATCCTCGGGTACTGGGCCTCCGGCCCAGAACGTTTACTCGTCTATGAGTTCATCGAAAAGGGAAACCTCGATCAGTGGCTCCACGAGCCCGATCCCTCTCGCACCCCCCTGTCCTGGGAAACTCGCGTCAACATCATCCGCGGCGTGGCCCACGGGCTTTCCTACCTCCACGGGCTCGAGAAGCCCGTCATTCATCGCGACATAAAGGCCAGCAACATCTTGCTGGACTCCAAGTTCCATGCCCACATCGCTGACTTTGGGCTGGCCCGCAGGATCGATAAAACGCACTCCCACGTTTCCACACAGTTCGCGGGCACAATGGGCTACATGCCGCCCGAATACATTGAAGGGTCGAATGTGGCGAACACGAAGGTGGATGTTTATAGTTTTGGGATTTTGATGATTGAGACCATGTCCAGTCACCGGCCCAATTTGCCGATGAAATTGGGCGAGAATGCAATTGGGATTGTCCAGTGGGCGAAAAAGATGAGGGAGCAAAATGCGGAGATGGATATGGTTGATGTGAATATTTCAAGAGAAGGGTTGAGTGAGGAGAGTGTTAGGGAGTATGTACGCATCGCTTGTGAGTGTACCAGTGCGATGCAGAAGGAAAGACCCGAAATGCCACAAGTTCTCCAATGCTTCTCCTCCATCCCACCCAATCTTTTTATCTCATCCTAA 1110 0.5631 MDNAFQAIVAAIGSFFIVSLLLVGAIMLCQQYRNSSKARTRHRSTTPAPTRDASFSLAVVDASWSSDPNLIKITWEELAVATENFSPHLIVGDGSFGLVYKARLSTNALVAVKKLSPDAFQGFREFRAEMETLSKLNHPNIVRILGYWASGPERLLVYEFIEKGNLDQWLHEPDPSRTPLSWETRVNIIRGVAHGLSYLHGLEKPVIHRDIKASNILLDSKFHAHIADFGLARRIDKTHSHVSTQFAGTMGYMPPEYIEGSNVANTKVDVYSFGILMIETMSSHRPNLPMKLGENAIGIVQWAKKMREQNAEMDMVDVNISREGLSEESVREYVRIACECTSAMQKERPEMPQVLQCFSSIPPNLFISS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0848 369 CDD STKc_IRAK 91 356 - -
Pvu7g0848 369 PANTHER RECEPTOR SERINE-THREONINE PROTEIN KINASE 1 359 - -
Pvu7g0848 369 SUPERFAMILY Protein kinase-like (PK-like) 66 357 IPR011009 -
Pvu7g0848 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Pvu7g0848 369 Gene3D Transferase(Phosphotransferase) domain 1 161 361 - -
Pvu7g0848 369 Gene3D Phosphorylase Kinase; domain 1 53 160 - -
Pvu7g0848 369 PANTHER OS01G0253100 PROTEIN 1 359 IPR045271 GO:0004714|GO:0006468
Pvu7g0848 369 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Pvu7g0848 369 SMART serkin_6 85 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0848 369 ProSiteProfiles Protein kinase domain profile. 85 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0848 369 Pfam Protein kinase domain 90 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0848 Pvu-Chr7 8130972 8132457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0848 70 361 Receptor kinase-like Gene Family AT5G07280 44.710 2.34e-70 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pvu7g0848 Pkinase 9.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0848 - - gmx:100802728 586.26