Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0847 ATGGATCCTTTTACTGAAGAGTTGCCTCAGTACATACATATAAATCAAAATGAGTTTTTCATGCGAAGGCAGAAGAAGCAGAAGGAGGAGGATATTGCTATATGTGAATGCAAATACGATGCTAATGACACTGACAGTGCATGCGGGGATAGCTGCTTGAATGTTTTAACCAGCACGGAATGCACCCCTGGTTATTGCCCTTGTGATATCTTATGCAAAAATCAGAAATTCCAGAAGTGTGAATATGCTAAAACAAAGTTGTTTAAGACTGAAGGCCGTGGATGGGGTCTTTTGGCTGGTGAGGATCTCAAGGCAGGACAATTTGTCATCGAATACTGTGGAGAAGTAATATCATGGAAAGAAGCCAAACGTAGATCCCAGGCTTATGAAAATCAAGGCCTTAAAGATGCATTTATCATTTGCCTTAATGCATCTGAATCTATTGATGCAACCAGGAAAGGAAGCCTTGCTAGATTTATAAATCATTCCTGTCAACCGAATTGTGAGACGAGAAAATGGAATGTGTTGGGGGAAATAAGAGTTGGAATATTTGCAAAACATGATGTTCCTATTGGAACTGAATTAGCTTATGATTATAATTTTGAATGGTTTGGAGGTGCAAAGGTTCGTTGCCTATGTGGTGCACTCAAATGTTCAGGGTTCCTTGGAGCAAAATCTCGTGGTTTTCAGGAGGATACTTATCTATGGGAAGATGACGATGATAGGTACTCTGTTGAGAAAATTCCTGTATATGATTCTGCAGAGGATGAACCAGTGTCAAATGTTAACGGACGAACTGAATCCCCTTTGGATGTTATGCTTAAAGATGAGCAACTATCTGAGTCCACTGGTTTTAACGTTCAGTCCCTTGATTCAGTTCAGATGAAAGGTTTAGATGTCAAAAAGATTAAAACTGAAGTAACAGATGAGGATATGCACTTGTACAACCACGATACTGAACAGACGCTTTCACAAAAGAATGCAATGATATCACGAATCCGAAGTAATGCTGCAGGCAGAAACTATCACATTGGACCTAGGTCTATGTCTACCAAAAGATCAAGGGCATATAATGGCGGAAGGTTTAAAAATCTCGTAGAGAAGAAAATTGATGCAAAGTTTGCTGCTGGCCTCCTAGCATCCAAGGAAGCACAAGAGGAGATTTTGAATTGTGAGAAAAGAAAGGATGATGCTACATCTACTCTTGATTCCTTATACGATGAAATACGGCCTGCTATTGAGGAACACGAGAGGGATAGCCAAGACAGTGTATCCACCACAGTTGCAGAGAAGTGGATACAGGTTTGCTGCCTAAAATTGAAGGCTGAGTTTGATCTTTACTCGTCAATTGTCAAAAATGTTGCTTGCACTGCGCAAAGAGCACCTGGGCAAGCAAAACCTACTGAAGTAGATAATGAAAACGAAATTAAGTTCTTGACAGGTTGA 1446 0.4018 MDPFTEELPQYIHINQNEFFMRRQKKQKEEDIAICECKYDANDTDSACGDSCLNVLTSTECTPGYCPCDILCKNQKFQKCEYAKTKLFKTEGRGWGLLAGEDLKAGQFVIEYCGEVISWKEAKRRSQAYENQGLKDAFIICLNASESIDATRKGSLARFINHSCQPNCETRKWNVLGEIRVGIFAKHDVPIGTELAYDYNFEWFGGAKVRCLCGALKCSGFLGAKSRGFQEDTYLWEDDDDRYSVEKIPVYDSAEDEPVSNVNGRTESPLDVMLKDEQLSESTGFNVQSLDSVQMKGLDVKKIKTEVTDEDMHLYNHDTEQTLSQKNAMISRIRSNAAGRNYHIGPRSMSTKRSRAYNGGRFKNLVEKKIDAKFAAGLLASKEAQEEILNCEKRKDDATSTLDSLYDEIRPAIEEHERDSQDSVSTTVAEKWIQVCCLKLKAEFDLYSSIVKNVACTAQRAPGQAKPTEVDNENEIKFLTG* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0847 481 SUPERFAMILY SET domain 9 220 IPR046341 -
Pvu7g0847 481 ProSiteProfiles Post-SET domain profile. 207 223 IPR003616 -
Pvu7g0847 481 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 6 420 - -
Pvu7g0847 481 ProSiteProfiles AWS domain profile. 30 81 IPR006560 GO:0005634|GO:0018024
Pvu7g0847 481 ProSiteProfiles SET domain profile. 83 200 IPR001214 GO:0005515
Pvu7g0847 481 Pfam AWS domain 43 80 IPR006560 GO:0005634|GO:0018024
Pvu7g0847 481 Gene3D SET domain 3 235 IPR046341 -
Pvu7g0847 481 Pfam SET domain 94 200 IPR001214 GO:0005515
Pvu7g0847 481 SMART shorttest3 30 82 IPR006560 GO:0005634|GO:0018024
Pvu7g0847 481 Coils Coil 381 401 - -
Pvu7g0847 481 PANTHER SET DOMAIN PROTEINS 6 420 - -
Pvu7g0847 481 SMART set_7 83 206 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0847 Pvu-Chr7 8120097 8128028 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0847 65 222 C2H2 Transcription Factor Family AT2G23740 33.708 6.87e-21 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu7g0847 SET 4.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0847 - - gmx:100804657 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0847 7 8120097 8128028 Pvu7g0847 7 8120097 8128028 ECH