Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0821 ATGCAGCTTGGAGACACCACAGCCATGGAAACCTCCTCCGGAGAGGCTGTGGCGGCGCATGACGGTGGCGAGGTGATTATGATGGATGCAACTTCCGGTGAAGAGAAGGGAAAAGAGGGTGGCTTAGAAGAAGAAGAAGAAGGTGACAAGATCAACAACTCATGCGCTGGAAACAGATGGCCCCGCCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCGGATATGGATGCTGTATTTCGTGATTCAAGTCTTAAGGGTCCACTTTGGGAAGAAGTTGCAAGGAAACTAGCAGAACTGGGTTACCACCGAAGCTCGAAGAAATGTAAGGAGAAATTCGAGAATGTGTACAAGTACCACAAAAGAACCAAAGAGAGTAGAAGCGGGAAACAGGAGGGAAAACACTACAAGTTTTTTGATCAATTACAAGCCCTTGAGAACCAATTCATAGTCTCTTACCCGTTAACACCACAACCCACCTTGGCAACAACAAACACGGTTGCATTATTACCTCCCCCAACAAAGCCTAGTGATACAACCACAATCTCTTATGTCACCACCACTGTTCCCTCCACAAACCCTACAGCAATATCTCTCTTATCACCACCACCACCACCACCACCACCTACCAATGCCACCACCACAACCACCATCACTTCTCCAACAGTACTAACCAACCCTAGCAATCCTCCTCAACCCAACAACAATAACCATAACATCCCTTACTCTTTACCTAACATGAATAACCTCTTCTCCACAACTTCAACCTCTTCTTCCACGGCCTCTGATGAAGACTTGGAAGAGAAATACCGGAAGAAGAGAAAGTGGAAGGACTACTTCAGGAGGCTCACAAGGCAAGTCCTGGCCAAGCAAGAGGAAATGCAAAAGAGGTTCCTGGAAGCCATAGACAAAAGGGAGAGAGAACACGTGGCACAGCAAGACGCTTGGAGGATCCAAGAAATGGCAAGGATCAATAGAGAACACGAACTTCTTGTCCAAGAAAGATCAACGGCAGCAGCGAAAAATGCAGCAGTTATTGCTTTTTTGCAACAGTTATCTGGTCAGAACCAGAACCCCTCAACACAAGCCGGTGCCAATTTCCTTCAACCACCGCCTTCACAACCACCACCTACACCCCAAGTATCACAAGTAAAACCACCACCGCAACATGCTCCACAACCACAAACACCAATGGTGATGGCAAATATTAACAATATTGAAATTCAGAAAATGAGTAATGGTCACAGTGCAGTTGCTGCTACTCCTACAACTGCTGCTACTGCTATCTGCGTTGTTTCTACCACTCCTACTTCATTGAACTCTTTATCTTCTTCTAGGTGGCCAAAAGCTGAGGTTCATGCTTTGATAAGGTTGAGGACGAGTCTTGAAACCAAGTACCAAGAAAATGGACCAAAGGCTCCACTATGGGAGGACATATCAGCAGGAATGTTGAGGATCGGGTACAACAGGAGTGCCAAGAGATGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTCAAGGAAAGCAACAAGCATAGGCGCGAGAATAGTAAGACATGTCCCTATTTTAATGAACTCGATGCCATATACAAAGAAAAGAGCAAAACTCAGAACCCCTTTGGCGCTTCATTCCTCAACATGAAGCCACACGAGCTGATGGAGCCCTTGATGGTGCAACCGGAGCAGCAATGGAGACCTCCTTCCCAATACGAAGAGGGTGCAGTGAAGGAGAACAGTGAGAGCGAGTACGAAAGAAAAGAAAGAGAGGAGGAAGAGGAAGAAGATGATGAAGAGGTAGAAGAGGATGAGAATGAAGAGGGAGATCTAGAGAGTGTGGAAGATGAAGGAGGTAGCCGTTATGAGATTGCGACAAATAAACTTTCTTCAGTGGACGCAGTTTAA 1908 0.4596 MQLGDTTAMETSSGEAVAAHDGGEVIMMDATSGEEKGKEGGLEEEEEGDKINNSCAGNRWPRQETLALLKIRSDMDAVFRDSSLKGPLWEEVARKLAELGYHRSSKKCKEKFENVYKYHKRTKESRSGKQEGKHYKFFDQLQALENQFIVSYPLTPQPTLATTNTVALLPPPTKPSDTTTISYVTTTVPSTNPTAISLLSPPPPPPPPTNATTTTTITSPTVLTNPSNPPQPNNNNHNIPYSLPNMNNLFSTTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEEMQKRFLEAIDKREREHVAQQDAWRIQEMARINREHELLVQERSTAAAKNAAVIAFLQQLSGQNQNPSTQAGANFLQPPPSQPPPTPQVSQVKPPPQHAPQPQTPMVMANINNIEIQKMSNGHSAVAATPTTAATAICVVSTTPTSLNSLSSSRWPKAEVHALIRLRTSLETKYQENGPKAPLWEDISAGMLRIGYNRSAKRCKEKWENINKYFKKVKESNKHRRENSKTCPYFNELDAIYKEKSKTQNPFGASFLNMKPHELMEPLMVQPEQQWRPPSQYEEGAVKENSESEYERKEREEEEEEDDEEVEEDENEEGDLESVEDEGGSRYEIATNKLSSVDAV* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0821 635 MobiDBLite consensus disorder prediction 564 635 - -
Pvu7g0821 635 MobiDBLite consensus disorder prediction 198 269 - -
Pvu7g0821 635 ProSiteProfiles Myb-like domain profile. 58 116 IPR001005 -
Pvu7g0821 635 PANTHER - 4 625 - -
Pvu7g0821 635 MobiDBLite consensus disorder prediction 1 57 - -
Pvu7g0821 635 ProSiteProfiles Myb-like domain profile. 438 502 IPR001005 -
Pvu7g0821 635 MobiDBLite consensus disorder prediction 588 614 - -
Pvu7g0821 635 Gene3D - 60 121 - -
Pvu7g0821 635 Gene3D - 446 507 - -
Pvu7g0821 635 MobiDBLite consensus disorder prediction 31 52 - -
Pvu7g0821 635 SMART sant 442 504 IPR001005 -
Pvu7g0821 635 SMART sant 56 118 IPR001005 -
Pvu7g0821 635 MobiDBLite consensus disorder prediction 368 393 - -
Pvu7g0821 635 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 4 625 - -
Pvu7g0821 635 Coils Coil 578 608 - -
Pvu7g0821 635 CDD GT1 444 509 - -
Pvu7g0821 635 CDD GT1 58 123 - -
Pvu7g0821 635 MobiDBLite consensus disorder prediction 212 260 - -
Pvu7g0821 635 Pfam Myb/SANT-like DNA-binding domain 444 531 IPR044822 -
Pvu7g0821 635 Pfam Myb/SANT-like DNA-binding domain 58 144 IPR044822 -
Pvu7g0821 635 MobiDBLite consensus disorder prediction 355 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0821 Pvu-Chr7 7629468 7632978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0821 52 566 Trihelix Transcription Factor Family AT1G76880 45.709 2.40e-135 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu7g0821 Myb_DNA-bind_4 1.5e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0821 - - gsj:114370603 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1015 4 26419926 26422759 Pvu7g0821 7 7629468 7632978 PCT