Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0820 ATGATGCAGAATATCACGGCCATCGAAACTTTGACGCCATTTATTACGTTAATTATTCCTCGTGTTTATTATAGATATAATAAAATAAATAAACAAATTAGTTCACCCCGCAAAGAAAGGGAGAGAGAGAGAGGGGGGATAGCGGTTTGCTGCTGTAATTGCTGCGGTGCTGTTTTGGAAAAGAGGGAGAGAGACCCAAAAGAGACTATGCTTGGGGACTCAGCTGTGCTGGGAGCAGGAGGCGGAAGTGGCGGTGGGGAAGGTGGCGCCTCCGTCGATGCAGTGGGCGGGGTGACGCATGAGGGGGCGGTGGTGGCGAGCGGAGGCGGTGGCGGAGTTGGATCAAATTCGGGGGACGACGAAAGGGGTAGAATCGACGAGGGAGAACGTAGCTTCGGTGGTAACCGGTGGCCCCGACAAGAGACTTTGGCGCTGTTAAGGATACGGAAGGATATGGACGTGGCGTTTCGAGATGCAAGTGTTAAGGGTCCTTTGTGGGAAGAAGTATCCAGGAAAATGGCAGAGCTTGGGTATCACAGAAGTTCCAAGAAGTGCAAAGAGAAATTCGAGAACGTGTACAAGTATCACAAGAGAACCAAAGAAGGTCGAAGTGGGAAACAAGATGGAAAAACATATCGTTTCTTTGATGAACTACAAGCCCTTGAGAATCACACTCCAACACCGCATTCTCCCAACCCATCACCAAAACCACCACAATCAGCGCCATCAAGAGTAATTGCAACAACAGCTGCATCAGTGTCACTACCAATTGCAACAGCAACAGCTTCATCATTGTCACTTCCAATTCCAACAACAATAACAACAGTGCCAATGCAGCCAATACTGTCCAACACCACTCTCACCAGTACTGTCCCCCATATCACTGTTCCATCAACAACAACACTCCCTATAACCATACCCCAGCCCATTCTTACTACCCCATCAATACATCTCTCAATTCCTTCTAACCCTCCAACAAACCCTACCATCAACACAACCCCACCACCCTCTTTCCCCACGCTCCCCACCGACACCTTCTCCAATTCTAGCTCCTCCTCCACCTCCTCCGACGAAACATTGGAAGGTAGGCGCAAGAGGAAGCGCAAGTGGAAGGACTTCTTCGAGAGACTAATGAAGGAAGTGATCGAGAAGCAAGAGGATCTACAGAAGAAGTTCTTGGAAGCCATAGAGAAACGAGAACACGACAGAATAGCAAGAGAAGAAGCATGGAGAGTCCAGGAGATGCAAAGAATCAATAGAGAGAGAGAAATCCTCGCACAAGAAAGATCCATAGCCGCAGCCAAAGACGCCGCCGTCATGTCATTCCTTCAAAAAATAGCCGAACAACAAAACCTCGGTCAAGCATTGAGCAACATCAACCTCGTACAGCAACCACCACACCAACAACCTCAACCGCCACTGCAACAATTACCACCATCTAGTGTAGCGCCGCCTCCTGCACAACAACCACTGCCCGCGGTTGTTACACAGCCAGTGGTGTTGCCAGTCTTCTCACAAGTGACCAACATGGAGATAGTCAAAGTTGACAACAACAACAACAACAATAGTTGTGAGAATTTTACGCCATCGAGTTCTTCAAGGTGGCCAAAGGTGGAGGTTCAGGCATTGATAAAGCTTCGAACGAACCTGGATTCAAAGTATCAAGAGAACGGACCAAAGGGTCCTCTCTGGGAGGAGATCTCATCCTCAATGAGGAAGCTCGGGTACATCCGAAACGCGAAAAGGTGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAAGAAAGTGAAGGAAAGCAACAAGCGGAGACCGGAAGATTCCAAAACGTGCCCTTATTTCCACCAGCTTGACGCGCTGTACAGGGAGAGGAGCAAGGTGGAGGGCGTGGCGGCGGCGGTGAAGCCTGAGAGCACGGTGGCGCCGCTGATGGTGCGGCCGGAGCAACAATGGCCACCTCAGGAGGAATCGATGAGGGATAGGGATATCAGAATGGAGGACGTGGAGAATGAAGAGGATGAGTACGAGGAAGAGAGAGATGGTGAGGGAGAGGAAGAAGAAGATGATGAAGAGGATGAAGAAGGTGGTGGTGGTGGGAAATATGAGATAGTGGCGAACAAAACAAGTGGTGGTTCAGTTGGGGCATCAACAGAATAG 2157 0.4942 MMQNITAIETLTPFITLIIPRVYYRYNKINKQISSPRKERERERGGIAVCCCNCCGAVLEKRERDPKETMLGDSAVLGAGGGSGGGEGGASVDAVGGVTHEGAVVASGGGGGVGSNSGDDERGRIDEGERSFGGNRWPRQETLALLRIRKDMDVAFRDASVKGPLWEEVSRKMAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKQDGKTYRFFDELQALENHTPTPHSPNPSPKPPQSAPSRVIATTAASVSLPIATATASSLSLPIPTTITTVPMQPILSNTTLTSTVPHITVPSTTTLPITIPQPILTTPSIHLSIPSNPPTNPTINTTPPPSFPTLPTDTFSNSSSSSTSSDETLEGRRKRKRKWKDFFERLMKEVIEKQEDLQKKFLEAIEKREHDRIAREEAWRVQEMQRINREREILAQERSIAAAKDAAVMSFLQKIAEQQNLGQALSNINLVQQPPHQQPQPPLQQLPPSSVAPPPAQQPLPAVVTQPVVLPVFSQVTNMEIVKVDNNNNNNSCENFTPSSSSRWPKVEVQALIKLRTNLDSKYQENGPKGPLWEEISSSMRKLGYIRNAKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDALYRERSKVEGVAAAVKPESTVAPLMVRPEQQWPPQEESMRDRDIRMEDVENEEDEYEEERDGEGEEEEDDEEDEEGGGGGKYEIVANKTSGGSVGASTE* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0820 718 PANTHER - 70 707 - -
Pvu7g0820 718 ProSiteProfiles Myb-like domain profile. 135 193 IPR001005 -
Pvu7g0820 718 MobiDBLite consensus disorder prediction 105 134 - -
Pvu7g0820 718 MobiDBLite consensus disorder prediction 463 490 - -
Pvu7g0820 718 MobiDBLite consensus disorder prediction 315 366 - -
Pvu7g0820 718 MobiDBLite consensus disorder prediction 327 341 - -
Pvu7g0820 718 Gene3D - 137 198 - -
Pvu7g0820 718 Gene3D - 535 596 - -
Pvu7g0820 718 MobiDBLite consensus disorder prediction 466 490 - -
Pvu7g0820 718 SMART sant 133 195 IPR001005 -
Pvu7g0820 718 SMART sant 531 593 IPR001005 -
Pvu7g0820 718 Coils Coil 658 685 - -
Pvu7g0820 718 MobiDBLite consensus disorder prediction 223 244 - -
Pvu7g0820 718 Pfam Myb/SANT-like DNA-binding domain 533 620 IPR044822 -
Pvu7g0820 718 Pfam Myb/SANT-like DNA-binding domain 135 221 IPR044822 -
Pvu7g0820 718 Coils Coil 371 398 - -
Pvu7g0820 718 ProSiteProfiles Myb-like domain profile. 533 591 IPR001005 -
Pvu7g0820 718 MobiDBLite consensus disorder prediction 72 92 - -
Pvu7g0820 718 MobiDBLite consensus disorder prediction 119 134 - -
Pvu7g0820 718 MobiDBLite consensus disorder prediction 644 718 - -
Pvu7g0820 718 CDD GT1 533 598 - -
Pvu7g0820 718 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 70 707 - -
Pvu7g0820 718 CDD GT1 135 200 - -
Pvu7g0820 718 MobiDBLite consensus disorder prediction 342 357 - -
Pvu7g0820 718 MobiDBLite consensus disorder prediction 667 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0820 Pvu-Chr7 7585480 7590170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0820 129 651 Trihelix Transcription Factor Family AT1G76880 53.016 1.40e-160 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu7g0820 Myb_DNA-bind_4 1.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0820 - - pvu:PHAVU_007G079700g 1111.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1017 4 26529723 26533405 Pvu7g0820 7 7585480 7590170 PCT