Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0819 ATGGAAGGGAATTTGCCCCAGGGAGGTATAATTCAAGGTGGAACATCTTTTGGTGGCTTTAATTTGCCGGGATCAATTCGGGTTCAGCATCAAGCACAACATCCCCATACCATGCACCAACATCAAAGTCATCCGCGTCAAGGGTCTTCTGTACACTCCACAGTTCATGATGTTTTCCCTCTTACAATGGGAACCCTGCAGAATTGTGACCAAACCATTTCAATGACAGAGTTTAGTAAAGGAGACAGAAGCAAAAACTCAGCGAGTGAGGAAGACGAGCCGAGCTTTACCGAGGATGGTGTTGATTGTCACCATGAAGCTGGTAGAGGGAAGAAAGGATCGCCTTGGCAGCGGGTGAAATGGACCGATAAGATGGTAAAACTTCTGATAACCGCTGTTTCTTATATTGGTGAGGATGTAACTGGCGATGGTGGTGGAAGTGGAAGTGGAAGAAGGAAATTTGCAGTGTTACAGAAGAAGGGTAAGTGGAAATCTGTTTCCAAGGTCATGGCTGAGAGGGGTTATCATGTCTCACCTCAGCAATGCGAGGATAAATTCAATGATCTCAATAAAAGATATAAAAAGCTTAACGATATGCTAGGGAGAGGCACTTCTTGTCAGGTTGTTGAAAAGCCTGCACTGTTGGATGTAATAGATTTTCTTTCTGATAAAGAAAAGGACGATGTTCGAAAAATATTAAGCTCAAAACACTTGTTCTATGAGGAGATGTGTTCTTACCATAATGGTAATAGGTTGCATTTACCCCATGATCCTGCATTGCAACGTTCACTGCAGTTAGCGCTCCGAAATAGGGATGATCATGATAATGATGATATGAGAAGGTCCCATCATGACGATCAGGGCGAAGATGATCCAGATGTGGAAATTGATGATCATGATGACTTTGAAGAGAATTGTACTTCCCATGGTGATAGTAGAGGAATACATGCACCATTAGGTGGATCTATGAAGAAACCAAAACAAGGCCAAGATCAGGAAGATTGCAATACTTTTGGTAATTCTTTAAATTGTCAGGACTACAACAGAAGTTCATATCCCCATGGGCAGATGGTCCAATCTGATGTGAATCAAGGTTTACCTGAAAGCATGAGATCAGCTTGGTTACAGAAGCAATGGGTTGAATCTCGCTTCCTTCAGTTAGAGGAACAAAAGCTACAAATTCAGGTTGAGATGCTGGAACTAGAGAAACAGAGATTCAAGTGGCAGAGGTTTAGTAAAAAAAAGGATCGGGAGTTGGAGAAGCTAAGTCTAGAAAATGAAAGATTGAAGCTTGAAAATGAACGTCTTGCTTTAGAACTTAAGCGAAAGGAATTGAGCACTGGCTTTAAATAG 1353 0.4183 MEGNLPQGGIIQGGTSFGGFNLPGSIRVQHQAQHPHTMHQHQSHPRQGSSVHSTVHDVFPLTMGTLQNCDQTISMTEFSKGDRSKNSASEEDEPSFTEDGVDCHHEAGRGKKGSPWQRVKWTDKMVKLLITAVSYIGEDVTGDGGGSGSGRRKFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVEKPALLDVIDFLSDKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDNDDMRRSHHDDQGEDDPDVEIDDHDDFEENCTSHGDSRGIHAPLGGSMKKPKQGQDQEDCNTFGNSLNCQDYNRSSYPHGQMVQSDVNQGLPESMRSAWLQKQWVESRFLQLEEQKLQIQVEMLELEKQRFKWQRFSKKKDRELEKLSLENERLKLENERLALELKRKELSTGFK* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0819 450 Coils Coil 382 404 - -
Pvu7g0819 450 Gene3D - 121 195 - -
Pvu7g0819 450 MobiDBLite consensus disorder prediction 271 336 - -
Pvu7g0819 450 MobiDBLite consensus disorder prediction 26 53 - -
Pvu7g0819 450 Pfam Myb/SANT-like DNA-binding domain 118 246 IPR044822 -
Pvu7g0819 450 MobiDBLite consensus disorder prediction 1 53 - -
Pvu7g0819 450 MobiDBLite consensus disorder prediction 83 115 - -
Pvu7g0819 450 MobiDBLite consensus disorder prediction 271 289 - -
Pvu7g0819 450 PANTHER FACTOR, PUTATIVE-RELATED 1 449 - -
Pvu7g0819 450 Coils Coil 412 446 - -
Pvu7g0819 450 PANTHER F16F4.11 PROTEIN-RELATED 1 449 - -
Pvu7g0819 450 MobiDBLite consensus disorder prediction 77 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0819 Pvu-Chr7 7564628 7571312 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu7g0819 Myb_DNA-bind_4 9.4e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0819 - - pvu:PHAVU_007G079600g 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1018 4 26802474 26805894 Pvu7g0819 7 7564628 7571312 PCT