Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0779 ATGGAACAGAAACATGTGCTGTTGTCAGCATTGAGTGTTGGGGTTGGATTGGGTGTAGGACTTGGATTGAGCACAGGACAAGCTGTTCAAAAATGGATGGGGGGGAGTTGTGAGTCTGATGAGATTTCTGGGGAGCAAATTGTGCTGGAGCTCAACAACAAAGTCATTGATGGGAAGAACAGCAAAACCACATTTAATGACTTTCCTTATTACTTAAGTGAAAGAGTCCGATTTTCGTTAACAAGTGCTGGATATGTTTATTTAAAACAAGACTTTTCCAAGCACATGAGGAACCTTTGTCCAGCAAGCAGAGCTATTTTGCTTTCGGGACCTGCAGAACTTTATCAGCAAAAGCTTACCCAAGCTTTAGCTCATTACTTTGGATCGAAGTTACTGTTGCTAGACATTGTTGACTTCTCATTGGAGATGCAGAGGAAATATGGATTTCTCAGAAAAGAACCATATTTTAAAAGGTCAATTTCTGATGTTACTTTGGAGCGAGTGTCGGGTTTGTTTGGGTCCTTTCCAATCCTTCCTTCAACTTGCAGAACCAGAGGTACACTACTCCGACAGAGTAGTGAAATTGAAAATTCCAGAAATCCTCTGAAACTTTGTAGGAATGCCTCTGCTGGATGTGATACGATTAGCTCTTCTGAATGTGATCAATCAGATCCAGCTCCTTTGAAGTGCTCAAGCGGCTTCTGTTTCGATGAAAAGGTCTTCGTAGAATCACTTTATAAGGTCTTGGTTTCTATCTCAGAAACCAGTTCCATTATTTTATACATCAAGGATGTTGAGAAGCTCTTTGTTCGATCACCAAGGCTACAGAATTTGTTCCAAAAGTTAATAAAGAAACTTTCAGGACCAGTATTAATACTCGGTTCGCAGATATCTGATTCTGACAAGCTCACTATGTTATTCCCTTACAACATTGAGATCAAACCACCTGAAAATGACAGCCATCTTGCAAGCTGGAAAACCAAACTGAAAGAGGACATGAAAACAATTCTGTTTCAAGATAGCAGAAACCACATTGCTGAAGTACTTGCAGCAAGTGACATTGATTGTGATGACTTGAATTCAGTCTGCCATGCTGACACTATGCTACTCAGTAATTCTATTGAAGAGATTGTGGCATCTGCAGTTTCTCACCACCTTACGGAAACTAAAGATCCAGAATATCGAAATGGAAAACTAGTTATATCAGCCAAGAGTTTGTCCCATGTATTGAGTTCGTTCCAGGAAAGTGAAAGTAATTCGGAGAGTAACGATTCAAACAAGGATGTTCCTCCTGACAACGAGTATGAGAAGCGCATGAGAGCAGATGTTGTGCCTGCAAAAGAGATAGGAGTTAGATTTGAAGATATTGGTGCATTGGATGATATTAAAGAAATACTTCAAGATGAGGTCCTACTTCCCCTCAGAAGACCAGATTTATTCAATGGTGGGCTTTTGAAGCCTTATAAAGGTATATTGCTTTTTGGGCCTCCTGGTACAGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGAAGCAAGTTTCATCAATGTCTCAATCTCGACCATCACTTCAAAATGGTTTGGAGAAGATGAAAAGAATGTCCGAGCTCTGTTTTCACTAGCAGCTAAGGTTGCTCCAACTATTATTTTTATTGATGAGGTTGATAGCATGCTTGGGCAACGGACTAAATGTGGAGAGCATGAGGCAATAAGGAAGATTAAAAATGAATTCATGGTCCACTGGGATGGGCTATTGTCAAAGCCTAGTAACCGAATTCTGGTTCTTGCTGCAACTAACAGGCCATATGACCTTGATGAGGCAATTATAAGACGGTTTGAGCGCAGGATCATGGTTGGCATTCCATCTGCTGAGAACAGGGAAATGATCTTGAAAACTCTCCTAGCTAAGGAAAAATATGAAAATGTTGACTTTAAAGAGCTTTCAATCATGACAAAAGGATATAGTGGAAGTGATCTTAAGAATTTGTGCACGGCTGCTGCTTATAGACCTGTTAGAGAACTACTACGACAGGAGAGGAATAAGGAAAAGAAGAAAACGGAGGCAGAAGTTCAAAGCTCAGAAAATGCTTCTGATGCTAAAGAAGATAAAGAACACCGAGTCATTGCTTTGAGGCCTTTAAACATGGATGACTTGAGACAGGCAAAGAGTCAGGTGACTGCTAGTTTTGCAGCAGAAGGATCAATAATGAGTGAGCTTGAGGAGTGGAATGATTTATTTGGAGAAGGAGGTTCAAGGAAGAAGAAGCAGGAGCAGCTTACCTATTTCCTTTAG 2298 0.4043 MEQKHVLLSALSVGVGLGVGLGLSTGQAVQKWMGGSCESDEISGEQIVLELNNKVIDGKNSKTTFNDFPYYLSERVRFSLTSAGYVYLKQDFSKHMRNLCPASRAILLSGPAELYQQKLTQALAHYFGSKLLLLDIVDFSLEMQRKYGFLRKEPYFKRSISDVTLERVSGLFGSFPILPSTCRTRGTLLRQSSEIENSRNPLKLCRNASAGCDTISSSECDQSDPAPLKCSSGFCFDEKVFVESLYKVLVSISETSSIILYIKDVEKLFVRSPRLQNLFQKLIKKLSGPVLILGSQISDSDKLTMLFPYNIEIKPPENDSHLASWKTKLKEDMKTILFQDSRNHIAEVLAASDIDCDDLNSVCHADTMLLSNSIEEIVASAVSHHLTETKDPEYRNGKLVISAKSLSHVLSSFQESESNSESNDSNKDVPPDNEYEKRMRADVVPAKEIGVRFEDIGALDDIKEILQDEVLLPLRRPDLFNGGLLKPYKGILLFGPPGTGKTMLAKAIANEAEASFINVSISTITSKWFGEDEKNVRALFSLAAKVAPTIIFIDEVDSMLGQRTKCGEHEAIRKIKNEFMVHWDGLLSKPSNRILVLAATNRPYDLDEAIIRRFERRIMVGIPSAENREMILKTLLAKEKYENVDFKELSIMTKGYSGSDLKNLCTAAAYRPVRELLRQERNKEKKKTEAEVQSSENASDAKEDKEHRVIALRPLNMDDLRQAKSQVTASFAAEGSIMSELEEWNDLFGEGGSRKKKQEQLTYFL* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0779 765 Pfam ATPase family associated with various cellular activities (AAA) 491 620 IPR003959 GO:0005524|GO:0016887
Pvu7g0779 765 Gene3D - 451 733 IPR027417 -
Pvu7g0779 765 Pfam AAA+ lid domain 643 679 IPR041569 -
Pvu7g0779 765 ProSitePatterns AAA-protein family signature. 594 613 IPR003960 GO:0005524|GO:0016887
Pvu7g0779 765 MobiDBLite consensus disorder prediction 412 439 - -
Pvu7g0779 765 SMART AAA_5 487 624 IPR003593 -
Pvu7g0779 765 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 450 672 IPR027417 -
Pvu7g0779 765 Gene3D - 623 727 - -
Pvu7g0779 765 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 426 765 - -
Pvu7g0779 765 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 422 - -
Pvu7g0779 765 MobiDBLite consensus disorder prediction 681 707 - -
Pvu7g0779 765 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 422 - -
Pvu7g0779 765 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 426 765 - -
Pvu7g0779 765 Coils Coil 673 705 - -
Pvu7g0779 765 CDD AAA 485 621 - -
Pvu7g0779 765 MobiDBLite consensus disorder prediction 412 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0779 Pvu-Chr7 7016455 7024238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0779 451 722 Calmodulin-binding Proteins AT3G56690 36.201 9.33e-43 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0779 - - gmx:121172906 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1100 4 32523041 32523969 Pvu7g0779 7 7016455 7024238 PCT
Pvu7g0779 7 7016455 7024238 Pvu4g1093 4 32290094 32297182 PCT