Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0770 ATGGATGAGGACTGGGATCTCTTTGCCATCGTTCGAAGCTGTCAATCACCTACCAATACTTCCACCACACCAATTCCACAAACCACCACCAATACTACTTCCATTGTAAAGGAACACAAATACGATGCATTTTCTTTTCCCAATACAGTGGAACCCATCACCAATGACTTTCATCACCTACACCAATTCTTTTCACCCTTTAACCCCACCACCACCACCACCACCACTACCCTTAATGCTCCTCGCATCAATCCTAATTCCCCTTATTTTGCACAACAGGACACCCAGCAAATTAGTGACCACCTTCGCATTTCGCCTCATTTTCCGCCAGAACCCTCCACTCCCAGTTTCAATAGATTCCCTCACCATCAACAACACCAACAGAATCAACTACAGCTACTTCACAAACACGAATTTCCTTCACCCCAGAACAATTCTCCCACAGTTTCACCAAACACACAACCTCAAACACCCAAATCCAGAAAAAGAAAAAGCCAACAGAAGAAAATGGTGTGCCAGGTAACTGCAGATAACCTCTCAGCAGATTTGTGGGCATGGCGAAAATACGGGCAGAAACCAATTAAGGGTTCTCCGTATCCAAGGAATTACTATAGGTGTAGCAGCTCCAAAGGTTGTATGGCTCGAAAACAAGTTGAACGGAGTAACACTGAAACCGACATGTTCATCGTTACGTACACCGGAGACCACTCGCATCCCCGGCCAACCCACCGGAACTCGCTCGCCGGAAGCACCCGGAATAAGAATCCGACAACGAATCCGCCGCCGTTACCCGGGTCACTCTCCTTCCAAGCGGCCCCCTTTTCTTCTTCTTCTTCTTCTCCACCACACTCTCCAACGTCGCCGTCGGAAGATCCACCGGAAAACGGCGATCTTGAACCCGACCCGGACATGGAAACCGACGTGGACGATGACGGTGACATTCGCTGA 948 0.4873 MDEDWDLFAIVRSCQSPTNTSTTPIPQTTTNTTSIVKEHKYDAFSFPNTVEPITNDFHHLHQFFSPFNPTTTTTTTTLNAPRINPNSPYFAQQDTQQISDHLRISPHFPPEPSTPSFNRFPHHQQHQQNQLQLLHKHEFPSPQNNSPTVSPNTQPQTPKSRKRKSQQKKMVCQVTADNLSADLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCMARKQVERSNTETDMFIVTYTGDHSHPRPTHRNSLAGSTRNKNPTTNPPPLPGSLSFQAAPFSSSSSSPPHSPTSPSEDPPENGDLEPDPDMETDVDDDGDIR* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0770 315 SMART WRKY_cls 180 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g0770 315 ProSiteProfiles WRKY domain profile. 175 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g0770 315 MobiDBLite consensus disorder prediction 269 284 - -
Pvu7g0770 315 Gene3D WRKY domain 163 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu7g0770 315 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 294 IPR044810 GO:0003700
Pvu7g0770 315 SUPERFAMILY WRKY DNA-binding domain 177 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu7g0770 315 MobiDBLite consensus disorder prediction 117 160 - -
Pvu7g0770 315 MobiDBLite consensus disorder prediction 231 315 - -
Pvu7g0770 315 Pfam WRKY DNA -binding domain 182 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g0770 315 MobiDBLite consensus disorder prediction 294 315 - -
Pvu7g0770 315 MobiDBLite consensus disorder prediction 103 172 - -
Pvu7g0770 315 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 3 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0770 Pvu-Chr7 6907213 6908842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0770 159 304 WRKY Transcription Factor Family AT5G52830 63.265 2.00e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu7g0770 WRKY 3.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0770 K13425 - gmx:100792164 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1125 4 34620507 34622280 Pvu7g0770 7 6907213 6908842 ECH
Pvu10g1086 10 36231937 36233733 Pvu7g0770 7 6907213 6908842 ECH
Pvu8g0593 8 5181941 5183860 Pvu7g0770 7 6907213 6908842 ECH
Pvu2g1648 2 30201373 30202358 Pvu7g0770 7 6907213 6908842 ECH
Pvu10g1512 10 41665877 41671047 Pvu7g0770 7 6907213 6908842 ECH
Pvu7g0770 7 6907213 6908842 Pvu7g0770 7 6907213 6908842 ECH
Pvu4g1125 4 34620507 34622280 Pvu7g0770 7 6907213 6908842 PCT