Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu7g0761 | ATGGTATCTAAAAACTCCAACCCCTCTGAGGCTTCTTACATGGACCCTTCTGCTATGTCGCTCCTCCCTTTTGCGACGGCTGTCACCGCCACCGATGCCCTTGAGAACCCTGCTAAGAAGACTCGCAAACCTTACACTATCACCAAGTCTAGGGAGAGTTGGACCGAACAGGAGCATGACAAGTTCCTAGAAGCTCTGCAGCTATTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGTTATCCAGATACGTAGCCATGCTCAGAAATACTTTCTAAAAGTTCAGAAGAATGGGACAAGTGAACATCTTCCTCCACCCAGACCAAAAAGAAAAGCTGCTCATCCATATCCTCAGAAAGCTTCAAAAAATGTTCCAGTGCTCTCACAAGTGTCAGGATCCTTTCAATCTTCATCGGCTTTGCTTGAACCAGGATACATAATAAAGCATGATTCTTCGGCAATGCTTAAAACTCCTATTATTAACACTGCCTGGTCAAACAACTCTCGGCAGAAATCCGCCAATTTATTGCATGGGCACAAGGTGAATAGTTGTTGCAGTAACAGTGAAAGTCCAAGAGCACAGTTGGTTGGTGAATCTAATGGTCAAGGGAATAATATCCATCCATTGAGAGTTCTTCCAGATTTTTCTGAAGTTTACGGCTTCATTGGCAGTGTATTTGATCCAAATGTAACTGGACATCTACAGAAACTAAAACGGATGGACCCTATAGATGTTGAGACGGTGCTATTGTTGATGAGAAACCTGACTATCAATTTAGCAAGACCAGAGTTTGAGGACCATAGAAGGCTGCTCGCATCATATGAGGTGGAACCTGAGTCAGATAAGTATTATAACAATGCAGATCGAAACATGCTTGATTTGCAGTTAAAGAGTGTTACATAG | 918 | 0.427 | MVSKNSNPSEASYMDPSAMSLLPFATAVTATDALENPAKKTRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHLPPPRPKRKAAHPYPQKASKNVPVLSQVSGSFQSSSALLEPGYIIKHDSSAMLKTPIINTAWSNNSRQKSANLLHGHKVNSCCSNSESPRAQLVGESNGQGNNIHPLRVLPDFSEVYGFIGSVFDPNVTGHLQKLKRMDPIDVETVLLLMRNLTINLARPEFEDHRRLLASYEVEPESDKYYNNADRNMLDLQLKSVT* | 306 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu7g0761 | 305 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 46 | 100 | IPR017930 | - | |
| Pvu7g0761 | 305 | CDD | SANT | 53 | 96 | IPR001005 | - | |
| Pvu7g0761 | 305 | PANTHER | PROTEIN REVEILLE 6 | 15 | 292 | - | - | |
| Pvu7g0761 | 305 | SMART | sant | 50 | 98 | IPR001005 | - | |
| Pvu7g0761 | 305 | MobiDBLite | consensus disorder prediction | 101 | 125 | - | - | |
| Pvu7g0761 | 305 | PANTHER | SWI/SNF COMPLEX-RELATED | 15 | 292 | - | - | |
| Pvu7g0761 | 305 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 49 | 98 | IPR006447 | GO:0003677 | |
| Pvu7g0761 | 305 | Gene3D | - | 54 | 101 | - | - | |
| Pvu7g0761 | 305 | ProSiteProfiles | Myb-like domain profile. | 46 | 96 | IPR001005 | - | |
| Pvu7g0761 | 305 | Pfam | Myb-like DNA-binding domain | 51 | 96 | IPR001005 | - | |
| Pvu7g0761 | 305 | ProSiteProfiles | SANT domain profile. | 49 | 102 | IPR017884 | - | |
| Pvu7g0761 | 305 | SUPERFAMILY | Homeodomain-like | 45 | 101 | IPR009057 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu7g0761 | Pvu-Chr7 | 6812105 | 6817258 | Dispersed/Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | MYB-related | Pvu7g0761 | Myb_DNA-binding | 2.5e-11 | CL0123 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu7g0761 | - | - | gmx:100794389 | 488.034 |
Event-related genes