Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0734 ATGTCAGAATCTGAGGAAGAAAATACAGACTATGTTACAAGGTCAAAGCCTGCAGAGGAAGCTGGCTGCACCATGGACTTCGATCTGGACTTAGAAACTTCATGGCCTTTGGATCACATGGCCTTTGTCTCCAATCCCATGTCACCTTTTCTGTTCTCCTCCTCCACCTCTGACCAGCCTTACTCTCCTCTGTGGGCTTTCTCTGATGGAGAAGACCTCAAGCTTCCAGCTTCTGCCTTCTCTGATTGCCACAAGATCTTCCCTTGTGATTCAAATTCAATAGCTGAAAAGCCAGAGGAGAATGATGACAACAAGAAGCCTTTGCCACCACTTGCGCCTATGCCACCAGTGGAAAATGTGGGTGGATATTGTGTAATCAAGGAAAGGATGACACAAGCGCTTCGATACTTCAAAGAGTTGACTGAATTGAATGTTTTGGCTCAAGTTTGGGCACCTGTGAGGAATGGTAATCGGTATGTGCTTACAACTTCAGGTCAACCATTTGTTCTTGATCCACATAGTAATGGACTCCATCAGTATCGAACGGTCTCTCTGATGTACATGTTTGATGTGGACGGGGAGAATGATGGAAGTTTGGGACTCCCTGGTCGGGTTTTTCAGCAGAAGTTACCAGAATGGACTCCCAATGTTCTGTATTATTCTAGTAAAGAATATCCACGCCGAGATCATGCTCAACATTACAATGTTCGTGGATCTTTGGCTTTGCCCGTGTTTGAGCCTGCATTGCAGTCATGTGTTGGTGTGCTGGAGTTGATAATGACTTCACAGAAGATTAACTATGCTCCCGAGGTTGATAAAATCTGCAAAGCCCTTGAGACAGTAAATTTGAGGAGTTCGGAAATTTTGGACCATCCATACACTCAGATATGTAATGAAGGCCGTCAGAATGCTTTATCAGAGATCTTGGAGATATTGACAGTGGTGTGTGAAACTCATAATTTACCTCTGGCCCAAACATGGATTCCCTGTAAGCATCGGATTGTCTTGGCCCAAGGTGGTGGTGTGAAGAAAAGTTGTTCAAGTTTTGATGGTAGCTGCATGGGGAAAGTTTGCATGTCTACAACTGACATAGCATTCTATATTATAGATGCTCATTTATGGGGTTTCCGTGAGGCCTGTCTTGAGCATCACTTGCAACAAAGTCAAGGGGTTGCTGGGAGAGCTTTTTTGTCCCAGAGCATGTGCTTCTGTTCAAACATTACTCAATTCTGCAAAACTGATTACCCCTTAGTTCATTATGCTCTCATGTTTGGATTAACAAGCTGTTTTGCAATATGTTTACGAAGCTCTCATACAGGAACTGATGATTATGTATTAGAGTTTTTTCTGCCTCCTAGGGTCACAGACTTTCATGAACAAAAGGCTTTGTTGGCGTCCATATTGGCAACAATGAAACAGCATTTCCAGAGTCTTAAGGTTGCTTCTGGTGTTGAACTTGAGGATGGTTCAATTGAAATTATTGAAGCAACAATTGAAAGAATTCACACGAGGCATGAATCCATTCCAATTGCCCCATCTTTTAGATCACCACCTAGACCTGATACTTCACCAAATATGGAGGAGGAAGTTCCACGTGATCCATCAGAACAACAACACATATTGATGTACTGTAATGGTACCAATCATGGAGCGAATCTCAGAGATAAAGCAGGTGGAAATATTGATCATATGACTACTTTAGAGACTAAAAACTCAAAGAAACCCTTAGAGAGGAAACGTGGAAAAACTGAGAAATCAATCAGTCTTGAAGTCTTGCAACGATACTTTGCTGGGAGTCTAAAAGATGCTGCAAAGAGCCTTGGTGTTTGCCCTACCACTATGAAGCGCATCTGTAGGCAGCATGGGATATCACGTTGGCCATCTCGAAAGATCAACAAGGTTAACCGTTCCCTGTCCAAGCTCAAGCGTGTTATTGAATCTGTTCAGGGTGCTGAAGGAGCATTTGGTTTGAATTCTCTCAGCACAAGTCCACTTCCCATTGCTGTTGGGTCGCTTCCAGAACCCTCTACTCCAAACAAGTTCAGCCAGCAAGTCTCAATGGGGATTAGACCATCAGAGCCTCAGATGAAAGTGAATGAATTGAATGCCTCCAAAGAATTAGAAACAAACAGACAAGCAGGAATGGAGGATCAATTGATAGGAGGAAGGATAAGAAATTTTGAGAGAGTTAGTAATGATAAAGGAGGTTCTACTCAAGAGGTTGGGAGAGAACCGAAAAGGACTAGAACTGGTAGTGGCTCAAGTGAGGATAGCACAAATCCTACTTCTCACAGTTCGTGGCATGACAGTCCCCCAAATGAAAGTTCACCTGTAAAAGATATATTCATTACTTCCAACCATGATCAATGTGCTGTCCTAAGGAGATCATCACCAGGGTCAACACTGCAGCCAGCCACTGATACACCAAACCACCCTACTTCTTACCCTATGCCTGAATTTGTGTCTGCAGAACTTCAAGAGCCATTTGGGGGGATGCTACTAGAGGATGCTGGTAGTTCTAAAGACTTAAGAAATTTGTGTCCTTCAGTAGCTGAGGCCATTTTGGAGGATCTGGTTCCTGAAGCTTGTGGGACTAATCCTCCAGCCTTGGATTTGTCTCCCAAGCAAAGCATGGGTACTCCTAATAAAGTAGTGACACCTTTTGCAGCTACAAAAGAAATGAAGACTGTGACTATCAAGGCAACATACAGGGAAGATATCATAAGATTCCGGGTCTCATTGGCATGTGGCATTGTGGAACTTAAAGAAGAAGTTGCCAAAAGATTGAAACTAGAGGTGGGTACATTTGATATCAAGTACCTTGATGATGATCATGAATGGGTTTTGATAGCCTGTGATGCAGACCTGCAGGAGTGCATGGATGTCTCAAGATCATCAGGAAGCAACATAATCAGGGTTTTGGTGCATGACATAACGTCCAATCTTGGAAGCTCATGTGAGAGCTCGGGGGAGTGA 2976 0.4338 MSESEEENTDYVTRSKPAEEAGCTMDFDLDLETSWPLDHMAFVSNPMSPFLFSSSTSDQPYSPLWAFSDGEDLKLPASAFSDCHKIFPCDSNSIAEKPEENDDNKKPLPPLAPMPPVENVGGYCVIKERMTQALRYFKELTELNVLAQVWAPVRNGNRYVLTTSGQPFVLDPHSNGLHQYRTVSLMYMFDVDGENDGSLGLPGRVFQQKLPEWTPNVLYYSSKEYPRRDHAQHYNVRGSLALPVFEPALQSCVGVLELIMTSQKINYAPEVDKICKALETVNLRSSEILDHPYTQICNEGRQNALSEILEILTVVCETHNLPLAQTWIPCKHRIVLAQGGGVKKSCSSFDGSCMGKVCMSTTDIAFYIIDAHLWGFREACLEHHLQQSQGVAGRAFLSQSMCFCSNITQFCKTDYPLVHYALMFGLTSCFAICLRSSHTGTDDYVLEFFLPPRVTDFHEQKALLASILATMKQHFQSLKVASGVELEDGSIEIIEATIERIHTRHESIPIAPSFRSPPRPDTSPNMEEEVPRDPSEQQHILMYCNGTNHGANLRDKAGGNIDHMTTLETKNSKKPLERKRGKTEKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFGLNSLSTSPLPIAVGSLPEPSTPNKFSQQVSMGIRPSEPQMKVNELNASKELETNRQAGMEDQLIGGRIRNFERVSNDKGGSTQEVGREPKRTRTGSGSSEDSTNPTSHSSWHDSPPNESSPVKDIFITSNHDQCAVLRRSSPGSTLQPATDTPNHPTSYPMPEFVSAELQEPFGGMLLEDAGSSKDLRNLCPSVAEAILEDLVPEACGTNPPALDLSPKQSMGTPNKVVTPFAATKEMKTVTIKATYREDIIRFRVSLACGIVELKEEVAKRLKLEVGTFDIKYLDDDHEWVLIACDADLQECMDVSRSSGSNIIRVLVHDITSNLGSSCESSGE* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0734 991 SMART PB1_new 896 978 IPR000270 GO:0005515
Pvu7g0734 991 MobiDBLite consensus disorder prediction 752 780 - -
Pvu7g0734 991 ProSiteProfiles PB1 domain profile. 896 978 IPR000270 GO:0005515
Pvu7g0734 991 CDD PB1_NLP 897 977 IPR034891 -
Pvu7g0734 991 MobiDBLite consensus disorder prediction 1 23 - -
Pvu7g0734 991 MobiDBLite consensus disorder prediction 796 815 - -
Pvu7g0734 991 Pfam PB1 domain 896 977 IPR000270 GO:0005515
Pvu7g0734 991 Gene3D - 893 977 - -
Pvu7g0734 991 MobiDBLite consensus disorder prediction 93 113 - -
Pvu7g0734 991 Pfam RWP-RK domain 586 634 IPR003035 -
Pvu7g0734 991 PANTHER PROTEIN NLP8 3 990 IPR045012 GO:0003700
Pvu7g0734 991 SUPERFAMILY CAD & PB1 domains 892 981 - -
Pvu7g0734 991 MobiDBLite consensus disorder prediction 796 818 - -
Pvu7g0734 991 MobiDBLite consensus disorder prediction 707 780 - -
Pvu7g0734 991 MobiDBLite consensus disorder prediction 510 530 - -
Pvu7g0734 991 ProSiteProfiles RWP-RK domain profile. 573 654 IPR003035 -
Pvu7g0734 991 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 3 990 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0734 Pvu-Chr7 6573725 6578325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0734 260 991 NLP Transcription Factor Family AT4G24020 52.324 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pvu7g0734 PB1 6.4e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0734 - - gmx:100786118 1769.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1211 4 37401537 37406539 Pvu7g0734 7 6573725 6578325 PCT