Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0722 ATGGTTAGCCAAAGGCAGCGACTGGCTCGGAAGCGATTCAAATCGGAGAACCCTGAACTGTTTCCGAAGGCCGAGCCCACACCCCCCAAAGACCCTAACAAGAAGAAGAAGAAGAAGAAGAAGAGTAGCGCGTTCAAGCGCAAAGCCGAGTCAAAACCCGGCTCCAGGAACAGACACCCTCTTAGAGTTCCCGGCATGAAGCCCGGCGAGAGCTGCTTCATCTGCAGGGCCAAAGACCACATCGCCAAGCTCTGTCCGGAAAAGACCGAATGGGAAAAAAACAAGATATGTTTGCGGTGTCGTCGACGCGGTCATAGGGCTAAGAACTGCCCCGAGGTCCAAGATGCCGCTAAGGATGTCAAATATTGTTATAACTGTGGGGAAACTGGCCACTCTCTCTCGCTTTGTCCGCACCCTCTTCAGGAAGGAGGGACACAGTTTGCCGAGTGCTTTGTCTGTAATCAGCAGGGACACTTGAGTAAAAACTGTCCTCAAAATACTCATGGCATTTATCCAAAGGGTGGTTGCTGTAAAATATGTGGTGGTGTGACACATTTGGCAAAAGATTGTCCTGACAAAGGAAGGCAGGGATCTGTTGCTGCTAATGGCCCTTTTGGTAGATCAATGAGAATTGAAGAGAGGCCCAGGGGCAAGGTTACCAAATTTATTAGCGGGGATGATATCGATGATGACTTCATGGCAGATGACACACATAGTGCCGACAATAACAAGTCAGCAAATTCAAAAGATGGCAATGTAAAACCAAAGAAGAAGGAACCTAAAGTTGTGATCTTTAACTAA 801 0.4819 MVSQRQRLARKRFKSENPELFPKAEPTPPKDPNKKKKKKKKSSAFKRKAESKPGSRNRHPLRVPGMKPGESCFICRAKDHIAKLCPEKTEWEKNKICLRCRRRGHRAKNCPEVQDAAKDVKYCYNCGETGHSLSLCPHPLQEGGTQFAECFVCNQQGHLSKNCPQNTHGIYPKGGCCKICGGVTHLAKDCPDKGRQGSVAANGPFGRSMRIEERPRGKVTKFISGDDIDDDFMADDTHSADNNKSANSKDGNVKPKKKEPKVVIFN* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0722 266 ProSiteProfiles Zinc finger CCHC-type profile. 97 112 IPR001878 GO:0003676|GO:0008270
Pvu7g0722 266 Gene3D - 65 119 - -
Pvu7g0722 266 MobiDBLite consensus disorder prediction 224 266 - -
Pvu7g0722 266 MobiDBLite consensus disorder prediction 250 266 - -
Pvu7g0722 266 MobiDBLite consensus disorder prediction 1 65 - -
Pvu7g0722 266 Pfam Zinc knuckle 150 165 IPR001878 GO:0003676|GO:0008270
Pvu7g0722 266 Pfam Zinc knuckle 122 138 IPR001878 GO:0003676|GO:0008270
Pvu7g0722 266 ProSiteProfiles Zinc finger CCHC-type profile. 150 165 IPR001878 GO:0003676|GO:0008270
Pvu7g0722 266 Gene3D - 120 171 - -
Pvu7g0722 266 SUPERFAMILY Retrovirus zinc finger-like domains 65 113 IPR036875 GO:0003676|GO:0008270
Pvu7g0722 266 SMART c2hcfinal6 149 165 IPR001878 GO:0003676|GO:0008270
Pvu7g0722 266 SMART c2hcfinal6 122 138 IPR001878 GO:0003676|GO:0008270
Pvu7g0722 266 SMART c2hcfinal6 96 112 IPR001878 GO:0003676|GO:0008270
Pvu7g0722 266 SMART c2hcfinal6 176 192 IPR001878 GO:0003676|GO:0008270
Pvu7g0722 266 SMART c2hcfinal6 71 87 IPR001878 GO:0003676|GO:0008270
Pvu7g0722 266 PANTHER OS04G0555800 PROTEIN 1 265 - -
Pvu7g0722 266 ProSiteProfiles Zinc finger CCHC-type profile. 123 137 IPR001878 GO:0003676|GO:0008270
Pvu7g0722 266 SUPERFAMILY Retrovirus zinc finger-like domains 118 167 IPR036875 GO:0003676|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0722 97 193 C2H2 Transcription Factor Family AT5G20220 28.070 8.51e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0722 - - gmx:121174300 440.654