Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0709 ATGGGTAAAGCACCTTGTTGTGAGAAACATGGAGTCAAAAGGGGAGCTTGGACTCCTGAAGAAGACCAAGCCTTGGTTGACTACATCAAGGAGCATGGTCATGGAAGTTGGCGTACACTTCCCAAACATGCAGGCCTCTTACGATGTGGAAAAAGCTGTCGGCTTCGGTGGATAAACTATCTTCGCCCTGGCATCAAGCGTGGCCCATTTACCAGTGAAGAAGAAAGTACAATTGTTCAACTCCATGGCATGCTTGGCAACAGGTGGGCTGCTATAGCATCCCAATTACCTGGAAGAACAGACAATGAGATTAAGAACTATTGGAACACCCATCTAAAGAAGCGTCTCCTTCGATCATGTCATTCCCTAAGAGAAAAACAGTCATGTCTGATTCTGGATCAAACTATTGTCAAGTCTGAATCTCCTTCTACGCGTCACATGGTACAATGGGAAAGTGTAAGAGTTGAGGCAGAGGCAAGGTTGTCAATGGAATCCTCGTTGCTCAATTCATGGCCAACGAGCACAACATGCCCTGATCACTTTCTTCATCTTTGGAATTCGGAGGTTGGGAAGTCATTTCGCATGGTCAAGGGAAAGGAAGGAGTTGTGAGTCAAAGTCCTATCTCGCATCTGTCATTCTCATCTAAATTGGAGTCTTGTTCAGACGTGTCAGTGCAGGTGAAAAACAATGGAACTAGTAGACTCAATCCACGCATTGAGGATGTGAACATGGTTCCTGAACAGATAAGTAGCTACAAACCAAAGCTTGATGACACAACTGGGTCTGACTCGGGCAATTATGAATTTCTTGATACTTCAGATTCTGCACTAAAGCACCTACTACATATGTCTGATGGTGATGTTGGATTCTTGGGACAGAATGATAATTTCTTGAATCTCCTTGATGCTACATGTGACCAAGATAGTTTCTTTCATATCTCTTCTTCAGAGAAAGGCAATCTTTGA 966 0.4379 MGKAPCCEKHGVKRGAWTPEEDQALVDYIKEHGHGSWRTLPKHAGLLRCGKSCRLRWINYLRPGIKRGPFTSEEESTIVQLHGMLGNRWAAIASQLPGRTDNEIKNYWNTHLKKRLLRSCHSLREKQSCLILDQTIVKSESPSTRHMVQWESVRVEAEARLSMESSLLNSWPTSTTCPDHFLHLWNSEVGKSFRMVKGKEGVVSQSPISHLSFSSKLESCSDVSVQVKNNGTSRLNPRIEDVNMVPEQISSYKPKLDDTTGSDSGNYEFLDTSDSALKHLLHMSDGDVGFLGQNDNFLNLLDATCDQDSFFHISSSEKGNL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0709 321 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pvu7g0709 321 CDD SANT 69 112 IPR001005 -
Pvu7g0709 321 CDD SANT 16 61 IPR001005 -
Pvu7g0709 321 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 295 - -
Pvu7g0709 321 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 295 - -
Pvu7g0709 321 Gene3D - 14 66 - -
Pvu7g0709 321 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pvu7g0709 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pvu7g0709 321 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pvu7g0709 321 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pvu7g0709 321 Gene3D - 69 116 - -
Pvu7g0709 321 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pvu7g0709 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pvu7g0709 321 SMART sant 66 114 IPR001005 -
Pvu7g0709 321 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0709 Pvu-Chr7 6269263 6272304 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0709 1 294 MYB Transcription Factor Family AT3G61250 50.662 3.19e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu7g0709 Myb_DNA-binding 3.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0709 K09422 - gmx:100807142 543.502