Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0693 ATGGCTCCGCCGCTGGAACACAACAGCGACTCCACCAGCGCCGAGTCTCAGAGATCCATTCCGACGCCGTTTCTCACCAAAACCTACCAGCTCGTCGACGATCCCGCTATCGATGATGTCATTTCCTGGAACGATTCTGGATCATCCTTCATCGTTTGGAACACCACCGTTTTTGCCAGGGATTTGCTTCCTAAATATTTCAAGCACAACAACTTTTCCAGCTTCGTTCGCCAACTCAACACCTATGGATTCAGAAAAGTTGTTCCTGATCGGTGGGAATTCTCCAACGAGTGTTTCCGAAGAGGCCAGAAGCGGCTTCTCTGCGAAATTCAACGACGGAAGATCCTCTCCTCGTCGCCGCCAGCCGGAGCAACTGGTAGCGTGGCGGTTCCGTCGCTGCCGACGCCCTCCGCGATTCCGATAGCGAAGTCGATTGTGTCGCCGTCGAACTCAACGGAGGAGCAGGTGATCTCGTCGAACTCGTCGCCGTCGAGAGCGCCGGCAGAGCTGTTGGACGAGAACGAGCGGCTGAAAAAGGAGAACATTCTTTTGACGAAGGAATTGGAAGAGATGAGATCCCTCTGCAACAATATATTCAATCTCATGTCGAATTACGCAACCGCTAGAGCGGACGGTGGCGCCGAGGCGGGGAAAATGCTTGGTTTGATGCCGTCGAAGCGGTGCTCCGGTGAGGGCGCGGTGAAGGAGATGAATCCAAAGCTATTTGGAGTGGCGATCGGTACGAAGCGATCGAGAGAGGAAGGACGTGGAGCGGAATACGATACGGTTTTGAGTCTTCATCAGTTCCACGAGGACATGAAATCTGAACCGTTAGATTTCGAAAGACATGGAGAAAACAGAATTACTTCGTGGCTAAATCACTATCGCACAGCAAATGAGAGAGTGTGTAATTGA 915 0.5224 MAPPLEHNSDSTSAESQRSIPTPFLTKTYQLVDDPAIDDVISWNDSGSSFIVWNTTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNECFRRGQKRLLCEIQRRKILSSSPPAGATGSVAVPSLPTPSAIPIAKSIVSPSNSTEEQVISSNSSPSRAPAELLDENERLKKENILLTKELEEMRSLCNNIFNLMSNYATARADGGAEAGKMLGLMPSKRCSGEGAVKEMNPKLFGVAIGTKRSREEGRGAEYDTVLSLHQFHEDMKSEPLDFERHGENRITSWLNHYRTANERVCN* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0693 304 SUPERFAMILY "Winged helix" DNA-binding domain 21 113 IPR036390 -
Pvu7g0693 304 PRINTS Heat shock factor (HSF) domain signature 24 47 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g0693 304 PRINTS Heat shock factor (HSF) domain signature 62 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g0693 304 PRINTS Heat shock factor (HSF) domain signature 75 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g0693 304 Pfam HSF-type DNA-binding 24 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g0693 304 Coils Coil 174 194 - -
Pvu7g0693 304 ProSitePatterns HSF-type DNA-binding domain signature. 63 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g0693 304 SMART hsfneu3 20 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g0693 304 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2A 11 286 - -
Pvu7g0693 304 Gene3D - 16 114 IPR036388 -
Pvu7g0693 304 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 11 286 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0693 Pvu-Chr7 6095460 6096981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0693 14 304 HSF AT5G62020 48.896 3.87e-88 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pvu7g0693 HSF_DNA-bind 8.5e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0693 K09419 - gmx:100780987 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0693 7 6095460 6096981 Pvu7g0693 7 6095460 6096981 ECH
Pvu4g1268 4 38764226 38766008 Pvu7g0693 7 6095460 6096981 PCT