Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0690 ATGCAAAATTCATCTTCCTTCTCCTACTCAAATCAAAGGAAGATGGAGGGCCCCAGTGAGATAGGTCTCATTGGGGAAAATTTTGATGCTGGTTTGATGGGGAGGATGAGGGACGATGAGTATGAAAGCCGCTCTGGAAGTGATAACTTCGATGGTGTATCTGGTGATGATCAGGATGGTGGTGATGATCAGCCACAGAGGAAGAAAAGATATCACAGACATACTCCTCACCAAATTCAAGAGCTCGAGTCTTTCTTCAAGGAGTGTCCTCATCCTGATGAGAAGCAAAGGTTGGATCTCAGTAAGAGGCTTGGCTTGGAGAATAAGCAAGTGAAATTCTGGTTTCAGAATCGACGAACCCAAATGAAGACCCAACTGGAACGCCATGAGAACATAATGCTCAGGCAGGAGAATGATAAGCTCAGAGCTGAGAACAGTCTGATGAAGGAAGCAATGTCAAATCCAGTGTGCAACAGCTGTGGTGGCCCAGCTATTCCTGGGCAGATTTCATTTGAGGAGCACCAGATTAGAATCGAGAATGCTAGACTAAAAGATGAGTTGAACCGTATATGTGCCTTAGCAAACAAGTTCCTTGGCAAGCCAATCTCATCAATGACCAGTCCCATGGCTCTACCAAACTCAAATTCTGGTCTGGAACTTGGTATTGGAAGGAACGGGCTTGGTGGTTCAAGCACTCTTGGCACTCCTTTGCCAATGGGACTTGACTTGGGAGATGGAGTGTTGGGCACTCAAACTGCAATGCCCGGGATTAGACCATCATTGGGGTTGATGGGAAATGAAGTTCAGCTTGAGCGATCTATGCTTATAGATCTTGCATTGGCTGCTATGGAGGAATTGCTAAAGATGACTCAGGCAGAGAGCCCTCTTTGGATTAAGAGTTTGGATGGTGAGAAGGAGGTGTTTAATCATGAGGAGTATGCAAGGTTGTTTTCTCCTTGTATTGGTCCAAAACCCACTGGTTATGTAACTGAAGCTACAAGAGAAACCGGGATAGTAATCATCAACAGTTTAGCCCTTGTGGAAACTTTGATGGACGCGAATCGATGGGCAGAGATGTTTCCTTCTATGATTGCTAGAGCTATCAACCTGGATGTTATATCCAATGGCATGGGTGGAACACGTAATGGTGCTCTACAAGTGATGCATGCTGAGGTACAATTGCTTTCACCACTAGTCCCTGTTCGTCAAGTGAGATTCATCCGGTTCTGTAAGCAGCATGCAGAAGGTGTATGGGCTGTGGTTGATGTTTCTATTGATATTGTTCATGATTCTGCTAATGCACAGCCATTCATGAGCTGTAGGAGGCTTCCTTCTGGCTGTATTGTGCAGGATATGCCCAATGGTTACTCCAAGGTTACTTGGCTTGAGCATTGGGAGTATGATGAGAGTGTTGTTCACCAACTTTATCGCCCATTGCTTAGTTCTGGTGTTGGATTTGGTGCTCATAGATGGATCGCCACTCTCCAAAGGCAATGTGAATGCTTGGCCATCCTCATGTCCTCTTCCATTTCAAGTGATGATCACACAGCATTGAGCCAAGCTGGTCGGAGGAGCATGTTGAAATTGGCACAACGCATGACTGGTAACTTCTGTTCGGGGGTTTGTGCTTCGTCTGCTCGTAAGTGGGACATGCTTCACATAGGGACTCTCGGTGATGACATGAAAGTGATGACTAGGAAAAACGTGGACGACCCTGGTGAGCCTCCTGGGATCGTGCTTAGTGCTGCAACTTCTGTTTGGATGCCAGTGTCACGGCAAAGGGTGTTTGATTTTCTGCGTGATGAACGGCTGAGAAGTGAGTGGGACATCTTGTCCAACGGTGGACCAATGCAGGAGATGGTACATATTGCCAAAGGACAAGGACATGGAAACTGCGTTTCCCTTCTCCGTGCTAATGCTGTTAATGCGAACGATAGCAGCATGCTGATTCTGCAAGAGACATGGATGGACGCTTCGTGCTCAGTGGTGGTATATGCGCCAGTTGACGTGCAATCACTGAACGTGGTGATGAGTGGGGGAGATTCTGCATACGTTGCACTCTTGCCTTCAGGCTTCGCCATTCTCCCGGATGGTCACTGCAACAACAACAGCAGTTGCAATGGCACAATGCAGAAGGGCGGCGGTGGCGAAGAGAGCGGGGGAAGCCTTCTGACAGTGGGGTTCCAAATTCTGGTGAACAGTCTCCCAACAGCAAAACTCACAGTGGAGTCAGTGGACACTGTGAATAACCTCATTTCATGCACCATTCAGAAGATCAAAGGCGCTCTCAGAGTTGCATAA 2301 0.4728 MQNSSSFSYSNQRKMEGPSEIGLIGENFDAGLMGRMRDDEYESRSGSDNFDGVSGDDQDGGDDQPQRKKRYHRHTPHQIQELESFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENDKLRAENSLMKEAMSNPVCNSCGGPAIPGQISFEEHQIRIENARLKDELNRICALANKFLGKPISSMTSPMALPNSNSGLELGIGRNGLGGSSTLGTPLPMGLDLGDGVLGTQTAMPGIRPSLGLMGNEVQLERSMLIDLALAAMEELLKMTQAESPLWIKSLDGEKEVFNHEEYARLFSPCIGPKPTGYVTEATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINLDVISNGMGGTRNGALQVMHAEVQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIDIVHDSANAQPFMSCRRLPSGCIVQDMPNGYSKVTWLEHWEYDESVVHQLYRPLLSSGVGFGAHRWIATLQRQCECLAILMSSSISSDDHTALSQAGRRSMLKLAQRMTGNFCSGVCASSARKWDMLHIGTLGDDMKVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRVFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQGHGNCVSLLRANAVNANDSSMLILQETWMDASCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGHCNNNSSCNGTMQKGGGGEESGGSLLTVGFQILVNSLPTAKLTVESVDTVNNLISCTIQKIKGALRVA* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0690 766 CDD homeodomain 67 125 IPR001356 GO:0003677
Pvu7g0690 766 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 14 764 - -
Pvu7g0690 766 MobiDBLite consensus disorder prediction 1 15 - -
Pvu7g0690 766 SMART HOX_1 66 129 IPR001356 GO:0003677
Pvu7g0690 766 MobiDBLite consensus disorder prediction 1 75 - -
Pvu7g0690 766 Pfam START domain 278 501 IPR002913 GO:0008289
Pvu7g0690 766 Coils Coil 119 154 - -
Pvu7g0690 766 MobiDBLite consensus disorder prediction 32 46 - -
Pvu7g0690 766 Pfam Homeodomain 68 123 IPR001356 GO:0003677
Pvu7g0690 766 SUPERFAMILY Homeodomain-like 52 125 IPR009057 -
Pvu7g0690 766 Gene3D - 55 141 - -
Pvu7g0690 766 SUPERFAMILY Bet v1-like 270 501 - -
Pvu7g0690 766 ProSiteProfiles START domain profile. 268 504 IPR002913 GO:0008289
Pvu7g0690 766 ProSiteProfiles 'Homeobox' domain profile. 65 125 IPR001356 GO:0003677
Pvu7g0690 766 SUPERFAMILY Bet v1-like 529 760 - -
Pvu7g0690 766 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 14 764 IPR042160 -
Pvu7g0690 766 SMART START_1 277 501 IPR002913 GO:0008289
Pvu7g0690 766 CDD START_ArGLABRA2_like 272 500 - -
Pvu7g0690 766 ProSitePatterns 'Homeobox' domain signature. 100 123 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0690 Pvu-Chr7 6042063 6048101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0690 37 763 Homeobox Transcription Factor Family AT3G61150 61.295 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pvu7g0690 START 6.3e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0690 K09338 - gmx:100785102 1427.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1412 2 26942731 26948742 Pvu7g0690 7 6042063 6048101 ECH
Pvu7g0690 7 6042063 6048101 Pvu7g0690 7 6042063 6048101 ECH