Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0689 ATGCAAAAGTCTGGATGTGGAAAAGGATCAGGTGTTGACCGCTCAAGAAGAGCAACAACCATTTCTTTAAAAAAGAAACTAAAAGATAAAATGGCAGTTCAGGGACAAGGGCGAAGCCAGATAATGGACGCCTTGGCTGAAATACAAGAGCGTCATGAAGCAGTTAGAGATGTTGAGAGAAAGCTTCTTGAGCTACAACAGATATTTCTTAATATTGCGGTGTTAGTGAATGCACAAGGAGACATGCTTGATAATATCGAAACACAGGTTTCAAGTGCAGTCAATCACGTGCAGCAAGGTAACAAAGGCCTCATAACGGCCAAGAAACATCAAAAGAACTCTAGAAAATAG 351 0.4074 MQKSGCGKGSGVDRSRRATTISLKKKLKDKMAVQGQGRSQIMDALAEIQERHEAVRDVERKLLELQQIFLNIAVLVNAQGDMLDNIETQVSSAVNHVQQGNKGLITAKKHQKNSRK* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0689 116 ProSitePatterns Syntaxin / epimorphin family signature. 51 90 IPR006012 GO:0005484|GO:0006886|GO:0016020
Pvu7g0689 116 SMART tSNARE_6 40 107 IPR000727 -
Pvu7g0689 116 Pfam SNARE domain 81 116 IPR000727 -
Pvu7g0689 116 Pfam Syntaxin 32 80 IPR006011 GO:0016020
Pvu7g0689 116 Gene3D - 44 116 - -
Pvu7g0689 116 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 45 107 IPR000727 -
Pvu7g0689 116 PANTHER SYNTAXIN-131-RELATED 2 32 - -
Pvu7g0689 116 PANTHER SYNTAXIN-131-RELATED 32 116 - -
Pvu7g0689 116 CDD SNARE_syntaxin1-like 44 106 - -
Pvu7g0689 116 PANTHER SYNTAXIN 2 32 IPR045242 -
Pvu7g0689 116 PANTHER SYNTAXIN 32 116 IPR045242 -
Pvu7g0689 116 SUPERFAMILY t-snare proteins 3 100 IPR010989 GO:0016020|GO:0016192
Pvu7g0689 116 MobiDBLite consensus disorder prediction 18 32 - -
Pvu7g0689 116 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0689 Pvu-Chr7 6031545 6032045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0689 3 116 SNARE and Associated Proteins AT3G03800 49.390 9.73e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0689 K08486 - pvu:PHAVU_007G067400g 224.942