Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0686 ATGGGCTTTCTCCGGCGAATTTTCGGCGCCAAAAAGCCCTCAGACTCCAAATCCCCCAAGAAAAGATGGGCCTTCCTCAAGCCCACCGCCCGGAACAAGTCACTCCCGCCGCCACCGCCCCCCTCTGCCATTAACACCCACTTTGATTCCTCCGCTCCCTTGGACGCCAACAAGCATGCCATCGCCGTTGCCGCCGCCACCGCAGCCGTCGCCGAGGCCGCTCTTGCCGCCGCACACGCCGCAGCCGAGGTTGTCAGACTCACTAGCGGCGCCGCCGCCGCCACAAGTAACAGCACCAGCACAAGACCCGCCGCGGCGGCGGCGCGTGTTAGCCAGCTGCGGTTGCCGGAGCTTACTGCCGCCGTTACGATACAATCGGCCTTCCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCACTAAAAGCATTGGTGAAGCTGCAAGCATTGGTTAGGGGCCACATTGTGAGAAAGCAAAGTGCTGATATGCTGAGGCGCATGCAAACATTGGTGAAACTTCAGGCCCAGGCACGTGCAAGCCGTGCGCACTTGTCATATTATACGCCTTCTTTCAAGTCTTCCCTTTCTCACTACCCTGTCCCAGAAGAATATGAACACCCACCTCGTGCCCTGAATACAAAATTTGATGGATCTTCTATCCTTAAGAGATGTAGTTCCAATGCCAATTGTAGGAACGTTGACTCAGAACGAGCCCGGTTTGATTCGAATTGGTTAAACCGTTGGATGGAATTAGATAACAAGTGCAGGCAAACGGGAGATGCTTCATTGAAAACTGGACGCCCTGATGATGATAAAAGTGACAAGATTCTCGAAGTAGATACTTGGAGGCCACACTTCAAGCCTCACCACAGTAGCAGCTCCTTACAGACAGCACATTGTTATTTGAGTTCTGACTACAATAATGATAACTTTATGGCACATGAGTCTCCGTCAAAACGTTCAGCAAAAGCTCTAAACCAAAGTTTCTCATCATCACGGGAGGTATTGCAGCTAAACTCTTTGAAGTTTCACAGAGGGAAAGAAGAAGCAACTTCAAGAACTGCCGACAATAGTCCACAATCATTTTCAGCCAATTCTAGAAATGGAAGTGGTGCAAAGAGGGGTCCCTTCACACCTACCAGGAGTGAGTGTTCATGGGGTTTCTTCAGTGGCTACTCGGGTCACCCCAATTACATGGCAAACACTGAATCTTTTCAAGCTAAGGTTAGATCACAAAGTGCACCCAGACAAAGGCTGGAGTTTGACAGATACGGTTCCACTAGGAGGCCTGTTCATGTGGTGGGGCCTAATTCAGACCAGGATTCAGATTTAAGAAACAAAGTCTTACCTGCTTCTAACAGTGTCAACAGAATTGGGAGTAGTAATTTAAGGTCACGTTGA 1398 0.5036 MGFLRRIFGAKKPSDSKSPKKRWAFLKPTARNKSLPPPPPPSAINTHFDSSAPLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGAAAATSNSTSTRPAAAAARVSQLRLPELTAAVTIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVKLQAQARASRAHLSYYTPSFKSSLSHYPVPEEYEHPPRALNTKFDGSSILKRCSSNANCRNVDSERARFDSNWLNRWMELDNKCRQTGDASLKTGRPDDDKSDKILEVDTWRPHFKPHHSSSSLQTAHCYLSSDYNNDNFMAHESPSKRSAKALNQSFSSSREVLQLNSLKFHRGKEEATSRTADNSPQSFSANSRNGSGAKRGPFTPTRSECSWGFFSGYSGHPNYMANTESFQAKVRSQSAPRQRLEFDRYGSTRRPVHVVGPNSDQDSDLRNKVLPASNSVNRIGSSNLRSR* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0686 465 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Pvu7g0686 465 MobiDBLite consensus disorder prediction 352 374 - -
Pvu7g0686 465 MobiDBLite consensus disorder prediction 343 377 - -
Pvu7g0686 465 MobiDBLite consensus disorder prediction 1 50 - -
Pvu7g0686 465 Pfam Protein of unknown function (DUF4005) 357 421 IPR025064 -
Pvu7g0686 465 Pfam IQ calmodulin-binding motif 141 158 IPR000048 GO:0005515
Pvu7g0686 465 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Pvu7g0686 465 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Pvu7g0686 465 Gene3D - 117 168 - -
Pvu7g0686 465 PANTHER IQ-DOMAIN 5-RELATED 1 461 - -
Pvu7g0686 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 162 IPR027417 -
Pvu7g0686 465 SMART iq_5 139 160 IPR000048 GO:0005515
Pvu7g0686 465 SMART iq_5 116 138 IPR000048 GO:0005515
Pvu7g0686 465 MobiDBLite consensus disorder prediction 438 465 - -
Pvu7g0686 465 PANTHER CALMODULIN-BINDING PROTEIN 1 461 - -
Pvu7g0686 465 MobiDBLite consensus disorder prediction 407 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0686 Pvu-Chr7 6008351 6013124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0686 1 419 IQD Protein Family AT5G62070 45.667 1.61e-62 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0686 - - gmx:100783694 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0686 7 6008351 6013124 Pvu7g0686 7 6008351 6013124 ECH
Pvu4g1274 4 38942943 38947629 Pvu7g0686 7 6008351 6013124 PCT