Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0674 ATGGAATCAAATCCCACCCATGACGGGGACGACACCTCGGAGAAGCTGTCACCGCCAATGGTGGAGCCGACGGAATCGTCGTCACCCTGTCTGTCTCCGTCGCAGGCGCTACAAATGAAAGAAGAGGCCATGGACGTGGAGCAAGGTGTTGACGTATCCCTTCCAATGAACGTTATTCCGATGCCTCTGACGGTGGCAAAGCGGCCGTCGAAGGACCGACACACGAAGGTTGAGGGGCGTGGCCGCAGAATCCGGATGCCGGCGACATGCGCCGCAAGGATCTTCCAGCTGACGCGCGAGCTGGGGCACAAGTCCGACGGAGAAACAATCCGGTGGCTGCTGGAGCACGCTGAGCCGGCTATCATCGAGGCCACCGGCACGGGCACAGTTCCGGCCATCGCGGTGTCTGTTGGCGGAACTCTGAAGATTCCGACATCCTCGGCGGCGAGGCCCGACGGAGAAGAAACCCCGAAGAAGCGAAGGAGGCGAGCGTCGAATAGCGAATTCATCGACGTGAACGAAAACCACGTTTCGGTGTCTTCAGGGCTCGCACCGATCGCGCAAACCGCATATGGCGGTGTTGCCAGTGGCGGTGGTGTAGTTCCCCTCTGGAATGGTAACGCTTCAGGGCCTTTCTTCATGTTCCCAAACGCCTCAAACCCGCCTCAGTATTGGGCCATTCCCGCAACCGCGGCCCCATTTTTTAACGTGCAGGCCCGGCCCATTTCGGGGTTCGTTTCCGCCTTGCAGATGCATGAACAAGATAGGCACTCCTCAGATGGTGGTGCCTCGGATTCTGTTAACTCTTCCTCCACTGTGGGTTCTAGCATGAGCTCAGTGAGTGTTACTACTGCTGTTGCTTCCTCCTCATCCGCGGCCACAACCACTCAGATACTCAGGGATTTCTCTTTGGAAATTTATGACAAGAAAGAGCTTCAATTTTTGGGGCAAGCGCCACCTTCTTCAAAGCCCTGA 975 0.5723 MESNPTHDGDDTSEKLSPPMVEPTESSSPCLSPSQALQMKEEAMDVEQGVDVSLPMNVIPMPLTVAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTSSAARPDGEETPKKRRRRASNSEFIDVNENHVSVSSGLAPIAQTAYGGVASGGGVVPLWNGNASGPFFMFPNASNPPQYWAIPATAAPFFNVQARPISGFVSALQMHEQDRHSSDGGASDSVNSSSTVGSSMSSVSVTTAVASSSSAATTTQILRDFSLEIYDKKELQFLGQAPPSSKP* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0674 324 Pfam TCP family transcription factor 70 154 IPR017887 -
Pvu7g0674 324 MobiDBLite consensus disorder prediction 261 276 - -
Pvu7g0674 324 MobiDBLite consensus disorder prediction 1 36 - -
Pvu7g0674 324 MobiDBLite consensus disorder prediction 1 15 - -
Pvu7g0674 324 MobiDBLite consensus disorder prediction 143 166 - -
Pvu7g0674 324 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 34 319 IPR005333 GO:0003700
Pvu7g0674 324 MobiDBLite consensus disorder prediction 19 35 - -
Pvu7g0674 324 MobiDBLite consensus disorder prediction 152 166 - -
Pvu7g0674 324 MobiDBLite consensus disorder prediction 251 276 - -
Pvu7g0674 324 ProSiteProfiles TCP domain profile. 70 124 IPR017887 -
Pvu7g0674 324 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 34 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0674 Pvu-Chr7 5863919 5865483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0674 55 315 TCP Transcription Factor Family AT5G51910 54.412 1.01e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pvu7g0674 TCP 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0674 - - gmx:100819475 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0674 7 5863919 5865483 Pvu7g0674 7 5863919 5865483 ECH