Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0670 ATGCAGCAACTGAAGTTAGAATCTGCAAGCATGGCAAAGAAGATTGAGCTTCTTGAAATTTCTAAAAGGAAGCTGCTGGGAGAAAACGTGAGTTGTTCCTATGATGAACTGAAAGGAATTGAGGATCAGCTGCAGATAAGTTTGTTAAGAGTCAGACAAAGAAAGGCTCAACTGTATATGGAGCAGATTGATCAACTACGATCCCAGGAGAATAACTTGCTCGAAGAGAATGTCAAATTAACTGAAATGTGGCAGGGGACGGAAAATACATACCAGCAGCAATGGCCTGGACACTCACAAGTTGAAGCACAAGTAGAAGCAGCACCTTACGGTTCAAGTAGCCAGAGTTTAGAAGTGGATACAGAATTGTTTATTGGACTGCCAAACCAGGGTTGCTGA 399 0.4236 MQQLKLESASMAKKIELLEISKRKLLGENVSCSYDELKGIEDQLQISLLRVRQRKAQLYMEQIDQLRSQENNLLEENVKLTEMWQGTENTYQQQWPGHSQVEAQVEAAPYGSSSQSLEVDTELFIGLPNQGC* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0670 132 Coils Coil 56 83 - -
Pvu7g0670 132 ProSiteProfiles K-box domain profile. 1 90 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pvu7g0670 132 Pfam K-box region 2 84 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pvu7g0670 132 PANTHER MADS-BOX TRANSCRIPTION FACTOR 56 7 132 - -
Pvu7g0670 132 PANTHER MADS BOX PROTEIN 7 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0670 Pvu-Chr7 5828259 5832107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0670 2 128 MADS-box Gene Family AT4G22950 42.636 3.32e-22 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0670 - - pvu:PHAVU_007G065500g 261.536