Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0665 ATGCAATATAGAGAGAGAAGCGAAAAGGGTGAGAGAGGTGCAGAGAAAGATCAGGAAGGAAGCATGGGAAGAGGGAAGGTCGTTCTGGAGAGAATACACAACAAGATCAATCGCCAAGTCACCTTCTCAAAGCGCAGAAACGGTTTGTTAAAGAAAGCCTTCGAACTATCTGTGCTATGCGACGCTGAAATCGCTCTTATCATCTTCTCCAGTCGTGGCAAGCTTTTTCAGTACAGCACCACTGA 245 0.4612 MQYRERSEKGERGAEKDQEGSMGRGKVVLERIHNKINRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLFQYSTT 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0665 81 MobiDBLite consensus disorder prediction 1 24 - -
Pvu7g0665 81 Gene3D - 34 81 IPR036879 GO:0003677|GO:0046983
Pvu7g0665 81 PRINTS MADS domain signature 24 44 IPR002100 GO:0003677|GO:0046983
Pvu7g0665 81 PRINTS MADS domain signature 44 59 IPR002100 GO:0003677|GO:0046983
Pvu7g0665 81 PRINTS MADS domain signature 59 80 IPR002100 GO:0003677|GO:0046983
Pvu7g0665 81 PANTHER MADS-BOX TRANSCRIPTION FACTOR 22 81 - -
Pvu7g0665 81 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 31 78 IPR002100 GO:0003677|GO:0046983
Pvu7g0665 81 PANTHER MADS BOX PROTEIN 22 81 - -
Pvu7g0665 81 SMART madsneu2 22 81 IPR002100 GO:0003677|GO:0046983
Pvu7g0665 81 CDD MADS_MEF2_like 23 81 IPR033896 GO:0000977|GO:0045944
Pvu7g0665 81 ProSitePatterns MADS-box domain signature. 24 78 IPR002100 GO:0003677|GO:0046983
Pvu7g0665 81 SUPERFAMILY SRF-like 23 80 IPR036879 GO:0003677|GO:0046983
Pvu7g0665 81 ProSiteProfiles MADS-box domain profile. 22 81 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0665 Pvu-Chr7 5765965 5766333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0665 22 81 MADS-box Gene Family AT2G03710 78.333 4.47e-30 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Pvu7g0665 SRF-TF 1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0665 K09264 - gmx:100778860 114.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0665 7 5765965 5766333 Pvu7g0665 7 5765965 5766333 ECH
Pvu7g0665 7 5765965 5766333 Pvu4g1307 4 39560687 39573167 PCT