Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0658 ATGAATCCTTTACACCCTAGTCATGGGTTGTACTCTCAGATTACAACTGATGATTACTGTTCCCTACCAATCCAAACAACCACTCTGCAAAATCAGATCTTGTGTGATCCTATGATGGATGGTAGTGCTCTCATTCCATGTACAGGTCAAATGGAAACTACCAAGGGCAAGCAGAGACAAAAGTTACCTGCTTGGAGAAACGAGGATTATAAGATCACCACCATAGATGAAAACAAGAAGTGGATGCATAGAGAGATCGAGAAACAAAGAAGGCAAGAAATGACCAGGCTTTGCACCCACTTTAGATCTCTTCTGCCTCTTCAATATATTAAGGGAAAGCGCTCAATTTCTGATCTTATGCATGAGGGTTCAAATTACATCAAACACCTTGAAAACAAAGTGAAACTGTTGGAAGCTAAGAGAGACAAGTTTAAGAAGTTGTCCAATTTGATTCCTGTTGTTTCTGATAGTGGAAGCTTTGGCACTACCCATTTTCCAATATGTGTCCTTGTTCATCCTTTTCCAGGAGGTGCTCAGATTAAGTGTAGTTATAGTTTCAGAAAATATGTCTTTTCTTTGTCAAGAGTGATAGATATGGTGCTTAAAGAAGGGCTTGATGTGGTCAACTGTACCTCCACCAAAACAGATGACAGGTTCATACACACTATCCGATTAGAGGTTCCACATATGATGACTGGGACTAATTACACTGAACTGCAAAGGAAGCTTGTCGAAGCAATATCATCATCTTCAAGTACAAGTTTGGAGGAGATAAGTATCTGA 783 0.3972 MNPLHPSHGLYSQITTDDYCSLPIQTTTLQNQILCDPMMDGSALIPCTGQMETTKGKQRQKLPAWRNEDYKITTIDENKKWMHREIEKQRRQEMTRLCTHFRSLLPLQYIKGKRSISDLMHEGSNYIKHLENKVKLLEAKRDKFKKLSNLIPVVSDSGSFGTTHFPICVLVHPFPGGAQIKCSYSFRKYVFSLSRVIDMVLKEGLDVVNCTSTKTDDRFIHTIRLEVPHMMTGTNYTELQRKLVEAISSSSSTSLEEISI* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0658 260 Gene3D - 71 156 IPR036638 GO:0046983
Pvu7g0658 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 78 130 IPR011598 GO:0046983
Pvu7g0658 260 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 65 255 IPR015660 GO:0003700|GO:0006357
Pvu7g0658 260 Pfam Helix-loop-helix DNA-binding domain 80 131 IPR011598 GO:0046983
Pvu7g0658 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 145 IPR036638 GO:0046983
Pvu7g0658 260 CDD bHLH_AtORG2_like 79 149 - -
Pvu7g0658 260 PANTHER TRANSCRIPTION FACTOR 65 255 - -
Pvu7g0658 260 Coils Coil 127 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0658 Pvu-Chr7 5677610 5679322 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0658 73 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 37.778 5.40e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu7g0658 HLH 4.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0658 - - gmx:100803786 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0658 7 5677610 5679322 Pvu7g0658 7 5677610 5679322 ECH
Pvu4g1314 4 39857777 39859294 Pvu7g0658 7 5677610 5679322 PCT