Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0656 ATGCCATCTCGACAACTCTCCACGTCGGCACCGCCTTCTAACCACCGCCTCTTAAACCCTCCGGTTACTTCCACCGCCTCCGTTTGCTCCTTTCTCTTTTTACTTTGCCTCTGCTTCCGCAAGCGTAAACGCACCACCCCTTCCTCCGACTCCGACTCCACTCCCCCTCACCCTTTCTCCTACCCCCTCCTCCGCCGCGCCACCAATTCCTTCTCCACGCGCCTTGGCCACGGCGGCTTCGGTCCCGTCTTCGCCGGCACCCTCGCCGGGGACCCCGTCGCCGTCAAGCTCATGGACTCTGCCTCCCAGCAGGGAGAGCGCGAGTTCCACAACGAGCTCTTCTTCGCGTCCAGGCTCCGGTCCCCCACTCTGGTGCCCGCCATCGGCTTCTCCTCCGACCCCAAACGCCGGCGTTTCCTCCTCGTCTACCACCTCATGCACAACGGCAACCTCCACGACGCCCTCTTGCGCTGCAAAACCCCTCACCTGAAGAGCTGGAATAACCGCTTCTCCATTATCCTCGACATCGCCAAAGGCATCCACTACCTCCACTCGCTCGACCCCCCTGTCATCCACGGCGACATCAAACCCTCCAACATTCTCCTCGACAACTCCTTCTCTGCCAAGCTCGCCGACTTCGGCCTTGCGCGATTAAAACCCCATGTGCAAGAGTTAAAAGAAAAACGCGACGAGAAGAGAAGGGACGAGTCCGAGAGCGATTGTGGGTCGGAGTTAGAAACTCAAAGCGTCAACACGGAGAAATCGTTTGAAGGCAACACCGGGTCGGATTATGTGATAGATTGGATTGGGAAGGAGTTGAAGAAGGAAAGGCCGACGGCGGTGAAGAAGGGTTCTTCTGGGTCGAGCAGTGGAGTAGCGGAGAAGAAGAAAAGTAGGAAGAAATTGGAGTGGTGGGAGACGATGGATGACAGTGGAGTTTCGAAGAAGGAGAAGAGAAGGGCAGCGAGGGAATGGTGGAAGGAGGAGTATTCAGAAGAGCTTGCGAGAAAGACGAAGAAAAAGAAAAAGAAGGAGAAGAGAAAGAGAAAGGGTAGTAACGGTGAGGGTGATTTGAAGGTAGAAGATGGTGTAGATTCGTGGTTGAGTGGGGATGTACATGGAGTTAGATGGAACAGCTACGATTCTGGGACTTGTAGTGGAGAAATAGTAGCCAAGAGTGGTGGTGTGAGTAGTAGTCCGAGTATGAGGGGAACGGTTTTCTACGTGGCTCCTGAGTATGGCTACAATGGGGATGTTTCTGAGAAGTGCGACGTGTACAGTTTCGGGGTTTTATTGCTTGTTATTGTTTCCGGCAGGAGGCCACTTCAGGTGACAGGGTCGCCTATATCGGAGTTTAAGCGTGCGAATCTGGTGTCTTGGGCGAGGCAATGTGGGCGGAGAGGGAAGCTTCTAGAAGTGGTGGATGAGGGTGTTGAGGGGTTGGACGAAGAGCAGGCTAGTCTGTGCGTGAGGGTTGCGCTCGCTTGTTTGCACAAGTCACCCGCTCGTCGTCCTTCCATGAAGGAGCTTCTCGGAATGCTGAGTGGCGAGCTGGAGCCTCCGCAGTTGCCGCGCAATACTTTCCCCCTCAACTCCAGGAACCAAAGTCGGTGA 1614 0.5527 MPSRQLSTSAPPSNHRLLNPPVTSTASVCSFLFLLCLCFRKRKRTTPSSDSDSTPPHPFSYPLLRRATNSFSTRLGHGGFGPVFAGTLAGDPVAVKLMDSASQQGEREFHNELFFASRLRSPTLVPAIGFSSDPKRRRFLLVYHLMHNGNLHDALLRCKTPHLKSWNNRFSIILDIAKGIHYLHSLDPPVIHGDIKPSNILLDNSFSAKLADFGLARLKPHVQELKEKRDEKRRDESESDCGSELETQSVNTEKSFEGNTGSDYVIDWIGKELKKERPTAVKKGSSGSSSGVAEKKKSRKKLEWWETMDDSGVSKKEKRRAAREWWKEEYSEELARKTKKKKKKEKRKRKGSNGEGDLKVEDGVDSWLSGDVHGVRWNSYDSGTCSGEIVAKSGGVSSSPSMRGTVFYVAPEYGYNGDVSEKCDVYSFGVLLLVIVSGRRPLQVTGSPISEFKRANLVSWARQCGRRGKLLEVVDEGVEGLDEEQASLCVRVALACLHKSPARRPSMKELLGMLSGELEPPQLPRNTFPLNSRNQSR* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0656 537 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 1 526 - -
Pvu7g0656 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Pvu7g0656 537 MobiDBLite consensus disorder prediction 226 241 - -
Pvu7g0656 537 ProSiteProfiles Protein kinase domain profile. 69 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0656 537 Pfam Protein tyrosine and serine/threonine kinase 71 231 IPR001245 GO:0004672|GO:0006468
Pvu7g0656 537 Pfam Protein kinase domain 399 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0656 537 MobiDBLite consensus disorder prediction 226 257 - -
Pvu7g0656 537 SUPERFAMILY Protein kinase-like (PK-like) 53 527 IPR011009 -
Pvu7g0656 537 Coils Coil 327 347 - -
Pvu7g0656 537 Gene3D Transferase(Phosphotransferase) domain 1 54 243 - -
Pvu7g0656 537 SMART serkin_6 69 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0656 537 PANTHER OS07G0586332 PROTEIN 1 526 IPR044576 -
Pvu7g0656 537 MobiDBLite consensus disorder prediction 277 296 - -
Pvu7g0656 537 Gene3D Transferase(Phosphotransferase) domain 1 381 522 - -
Pvu7g0656 537 MobiDBLite consensus disorder prediction 243 257 - -
Pvu7g0656 537 MobiDBLite consensus disorder prediction 336 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0656 Pvu-Chr7 5654511 5656702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0656 392 514 Receptor kinase-like Gene Family AT3G58690 34.884 3.01e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Pvu7g0656 PK_Tyr_Ser-Thr 1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0656 - - var:108325385 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1316 4 39898990 39901598 Pvu7g0656 7 5654511 5656702 PCT