Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0646 ATGGAAGGTAATGGCTTGGCGCCGTTGTTCTATGTTGGCCACCACAAGTTGAAGCTTCTCACGTCTCCACTTCTGCTCATGCTCTTCCTTCTTTCTCCATTTGCTTTGCCCCTCAGCGAAGAAGGACAGGCATTAATGGCGATGAAGGCTACTTTTAGCAATATGCCAGACGTGCTTCTTGACTGGGATGACGTTCACAATGACGACTTTTGCTCTTGGCGTGGAGTTTCCTGCGATAATGGCAGCCTTTCTGTGGTTTCTCTGAACCTTTCCAGCTTGAACCTCGGTGGGGAGATATCCCCAGCCATTGGTGACTTGAGAAACTTGCAGTCAATAGACTTGCAAGGGAATAAATTAACGGGGCAAATCCCAGATGAAATTGGAAACTGTGCAGCACTTTTTCATTTGGATTTGTCTGATAATCAGCTTTATGGTGATATACCTTTCTCCCTGTCAAAGCTAAAGCAACTTGAGTTTTTAAATTTAAAGAGTAATCAGATAACTGGTCCTATCCCTTCAACTCTAACCCAAATTCCAAATCTGAAGACTCTTGATCTTGCTCGAAATAGGCTCACTGGAGAGATCCCAAGATTACTCTATTGGAATGAAGTCTTGCAGTACCTCGGATTACGAGGGAACATGTTGAGTGGTGGTCTGTCCCCTGATATATGTCAATTAACTGGATTGTGGTATTTTGACGTGAGAGGCAATAATTTGACTGGTACTATACCTGACAGCATAGGGAACTGTACTAGTTTTGAAATCTTTGACATATCATATAATCAGTTTACTGGAGAGATTCCATATAATATTGGGTTTCTGCAAGTTGCTACTTTGTCACTTCAAGGAAATAGATTAACTGGGAAGATTCCAGAAGTGATTGGTTTGATGCAAGCCCTTGCAATATTGGATTTGAGTGAGAATGAGTTAGTGGGATCAATTCCCCCAATACTTGGGAATCTGACCTTCACTGGAAAGCTGTACCTTCATGGAAACATGCTTACTGGCCCGATACCTCCTGAACTCGGCAATATGTCCAAACTGAGCTACTTGCAATTGAATGACAACCACCTAATTGGTAAAATTCCAAATGAGTTTGGGAAGCTGGAACATCTTTTTGAATTGAATCTTGCCAATAATCATTTTGATGGAACTATTCCACATAACATAAGCTCCTGCACAGCCTTAAACCAGTTTAATGTGCATGGTAATCAGTTAGATGGTTCCATTCCATTGAGCTTCCGCAACCTTGATAGCTTGACATACTTAAACCTCTCTGCGAACAACTTCAAGGGGAATATACCCGTCGAGTTGGGGCATATTATTAATCTAGATACATTGGATCTATCTAGCAATAATTTTTCAGGACATGTTCCAGCATCTGTTGGTTATCTGGAACATCTCTTGACCCTCAACTTGAGTCACAACCACCTTGGAGGTTCCTTGCCAGCTGAATTTGGGAATCTCAGAAGCATTCAAATTCTTGACATGTCATTCAACAATCTCTCTGGTAGCATTCCTCCGGAAATTGGACAGCTGCAGAACCTTATGTCTTTGATTATGAACAACAATGATCTGCGTGGGAAGATTCCTGATCAGCTGACCAATTGTTTTAGTCTTACACTATTAAATTTGTCCTATAATAATCTTTCTGGAGTAATTCCTTCAATGAAGAACTTTTCAAGGTTTTCAGCTGACAGCTTCTTTGGAAATTCATTATTATGTGGAGATTGGTTGGGATCAATATGTCGTCCCTACATTCCGAAATCAAGAGAGATTTTCTCCAGAGTTGCTGTAGTATGTCTCACGCTTGGAATTATGATATTGTTAGCCATGGTCATTGTAGCCTTCTATAGATCCAGCCAATCTAAGCAATTGATGAAAGGATCTAGCAGAACTGGGCAAGGCATACTAGTTATTCTTCACATGGATATGGCTATCCACACCTTGGATGATATAATGAGAAGCACTGAGAATCTCAATGAGAAGTATATCATAGGTTATGGTGCCTCTAGTACTGTATACAAATGTGTTTTGAAGAATTCCCGACCAATTGCAATTAAGCGACTCTATAACCAACAACCACACAATTTAAGGGAGTTTGAGACCGAACTTGAGACAGTTGGTAGCATTAGACATAGAAACCTTGTCACCTTGCATGGATATGCACTTACTCCCGATGGAAATCTTCTTTTCTATGACTATATGGCGAATGGCTCATTGTGGGATCTTCTACATGGTCCCTCGAAGGTAAAACTTGATTGGGAAACACGTCTGAGGATTGCTGTTGGAGCAGCCGAAGGACTTGCTTATCTCCATCATGACTGCAACCCAAGAATAGTTCATAGGGACATAAAATCTTCGAATATTTTGCTGGATGAGAACTTCGAGGCTCATCTTTCTGATTTTGGTACTGCAAAATCCATCTCGACCGCAAGAACTCATGCATCGACTTATGTCCTTGGAACTATAGGCTATATTGACCCTGAGTATGCCCGAACATCTAGGCTGAATGAAAAATCGGATGTGTATAGCTTTGGCATAGTTCTTTTGGAGCTACTAACTGGAAAAAAGGCAGTGGACAATGAGTCTAATTTGCATCAATTGATATTGGCCAAGGCAGATAACAACACTGTAATGGAGGCTGTGGATGCAGAGGTGTCTATAACCTGCATTGATCTAGCTCATGTTAAGAAGACCTTTCAGCTTGCTTTGCTTTGCACGAAAAAGAACCCTTCTGAGAGGCCTACCATGCATGAAGTAGCCAGGGTTCTGGTATCACTACTTCCTTCACCTCCAAGTAAGATCCTTGCTCCACCTGCAAAGAAGTTTGACTATGCGCATTTTGTGATCGAGAAGGGACAACCTCGAAAAGTGGAAGGACAACAACCTCACCAAGAAGATAACTCAACCAATGCTCAATGGTTTGTTCGCTTTGGGGATGTTATATCGAAGAGCACTTGA 2964 0.415 MEGNGLAPLFYVGHHKLKLLTSPLLLMLFLLSPFALPLSEEGQALMAMKATFSNMPDVLLDWDDVHNDDFCSWRGVSCDNGSLSVVSLNLSSLNLGGEISPAIGDLRNLQSIDLQGNKLTGQIPDEIGNCAALFHLDLSDNQLYGDIPFSLSKLKQLEFLNLKSNQITGPIPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNMLSGGLSPDICQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEIFDISYNQFTGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGSIPPILGNLTFTGKLYLHGNMLTGPIPPELGNMSKLSYLQLNDNHLIGKIPNEFGKLEHLFELNLANNHFDGTIPHNISSCTALNQFNVHGNQLDGSIPLSFRNLDSLTYLNLSANNFKGNIPVELGHIINLDTLDLSSNNFSGHVPASVGYLEHLLTLNLSHNHLGGSLPAEFGNLRSIQILDMSFNNLSGSIPPEIGQLQNLMSLIMNNNDLRGKIPDQLTNCFSLTLLNLSYNNLSGVIPSMKNFSRFSADSFFGNSLLCGDWLGSICRPYIPKSREIFSRVAVVCLTLGIMILLAMVIVAFYRSSQSKQLMKGSSRTGQGILVILHMDMAIHTLDDIMRSTENLNEKYIIGYGASSTVYKCVLKNSRPIAIKRLYNQQPHNLREFETELETVGSIRHRNLVTLHGYALTPDGNLLFYDYMANGSLWDLLHGPSKVKLDWETRLRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFEAHLSDFGTAKSISTARTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNESNLHQLILAKADNNTVMEAVDAEVSITCIDLAHVKKTFQLALLCTKKNPSERPTMHEVARVLVSLLPSPPSKILAPPAKKFDYAHFVIEKGQPRKVEGQQPHQEDNSTNAQWFVRFGDVISKST* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0646 987 SMART LRR_typ_2 345 368 IPR003591 -
Pvu7g0646 987 SMART LRR_typ_2 417 441 IPR003591 -
Pvu7g0646 987 SMART LRR_typ_2 297 321 IPR003591 -
Pvu7g0646 987 SMART LRR_typ_2 178 202 IPR003591 -
Pvu7g0646 987 SMART LRR_typ_2 369 393 IPR003591 -
Pvu7g0646 987 SMART LRR_typ_2 226 250 IPR003591 -
Pvu7g0646 987 SMART LRR_typ_2 154 177 IPR003591 -
Pvu7g0646 987 SMART LRR_typ_2 489 513 IPR003591 -
Pvu7g0646 987 SMART LRR_typ_2 106 130 IPR003591 -
Pvu7g0646 987 SMART LRR_typ_2 465 488 IPR003591 -
Pvu7g0646 987 Pfam Leucine rich repeat 443 502 IPR001611 GO:0005515
Pvu7g0646 987 Pfam Leucine rich repeat 156 215 IPR001611 GO:0005515
Pvu7g0646 987 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 29 966 - -
Pvu7g0646 987 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 29 966 - -
Pvu7g0646 987 SUPERFAMILY L domain-like 274 363 - -
Pvu7g0646 987 Gene3D Ribonuclease Inhibitor 38 202 IPR032675 -
Pvu7g0646 987 SUPERFAMILY Protein kinase-like (PK-like) 637 925 IPR011009 -
Pvu7g0646 987 Gene3D Ribonuclease Inhibitor 203 316 IPR032675 -
Pvu7g0646 987 Pfam Leucine Rich Repeat 108 130 IPR001611 GO:0005515
Pvu7g0646 987 Pfam Leucine rich repeat N-terminal domain 39 79 IPR013210 -
Pvu7g0646 987 ProSiteProfiles Protein kinase domain profile. 660 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0646 987 Gene3D Phosphorylase Kinase; domain 1 621 735 - -
Pvu7g0646 987 SMART serkin_6 660 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0646 987 Gene3D Transferase(Phosphotransferase) domain 1 736 933 - -
Pvu7g0646 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Pvu7g0646 987 Gene3D Ribonuclease Inhibitor 325 586 IPR032675 -
Pvu7g0646 987 ProSiteProfiles Leucine-rich repeat profile. 180 202 IPR001611 GO:0005515
Pvu7g0646 987 Pfam Protein kinase domain 662 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0646 987 ProSitePatterns Protein kinases ATP-binding region signature. 666 688 IPR017441 GO:0005524
Pvu7g0646 987 SUPERFAMILY RNI-like 111 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0646 Pvu-Chr7 5535125 5542735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0646 108 987 Receptor kinase-like Gene Family AT5G07180 76.897 0.0 1360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Pvu7g0646 Pkinase 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0646 K20718 - gmx:100811653 1756.88