Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0632 ATGAATCCTCAGGGTCGAGTGAAGGAAGAGTTTCTTGGAGAAAGTTCTTCCTTTTATGGTGGCTATGATCCGCATCCAGTAATGATTGTTCCTCAACCAATTGAGGGGCTCCATCAAACTGGCCTTCCACCATTCCTCACAAAAACATACGACATTGTTGATGACCCTTCCACTAACCATATAATTTCCTGGAGCTCGGGGAACAACAGCTTCATTGTGTGGGATCCACAGGCCTTTTCCATAACCCTTCTGCCCAAGTTCTTCAAGCACAACAATTTCTCCAGTTTTGTCAGGCAACTCAACACCTATGGGTTTAAGAAGGTTGATCCAGATAAGTGGGAATTTGCTAATGAGATGTTTCTTAGAGGGAAAAGGATTCTTTTGAAGAACATTAGAAGGCGGAAAACAAATCATCAATCTCATGCGATGCAGCAAGGTGTGGATCCTTGTGTTGAGGTGGGGCAGTTTGGATTAGATAGAGAAGTTGATAGGTTGAAGCGTGACAGACAAGTTCTTATGGGGGAGTTGGTGAAACTCAGACAACAGCAACAGAATACTAGAGTTCACATTCAAGCAATTGAAGGAAGGCTTAAAAAGACTGAACAGAATCAGCAACAAACTATGAATTTCTTGGCCAGGGTAATGCAGAATCCTAACTTCGTGCAACAATTGGTTCAGCAAAAGGAGCTGAGAAAGGAGCTCGAGGAAGGTTTTTCCAAGAAGAGGAGGAGTCTTGATCAAGGGCCTAGTAATGTTGTTGAAGTAGGAGAATTAGATTGCGCTGAAGAGTACTCAAGTTTCATTGAACTTGAACCTCAAGTATACAATGAGAAAGTATTGGAGTTTGAGGTACCTGATCTTGACCTTGGTTTGAATCTGGAGGAGCAAATTGGAAGGCAAAAGAGAATGGAGGGAGATTATATTCAACTTGAAAGTATAGATAAAGATATTGATGAGGTGTTTTGGCAAGATTTGCTCAAAGAGGACATTGAAGATCAAGGTGTACTAGGTGTTGATGTATTGGCTCAGCAACTTGGTTATTTGGCTTCTAGTTATAAATAG 1062 0.4143 MNPQGRVKEEFLGESSSFYGGYDPHPVMIVPQPIEGLHQTGLPPFLTKTYDIVDDPSTNHIISWSSGNNSFIVWDPQAFSITLLPKFFKHNNFSSFVRQLNTYGFKKVDPDKWEFANEMFLRGKRILLKNIRRRKTNHQSHAMQQGVDPCVEVGQFGLDREVDRLKRDRQVLMGELVKLRQQQQNTRVHIQAIEGRLKKTEQNQQQTMNFLARVMQNPNFVQQLVQQKELRKELEEGFSKKRRSLDQGPSNVVEVGELDCAEEYSSFIELEPQVYNEKVLEFEVPDLDLGLNLEEQIGRQKRMEGDYIQLESIDKDIDEVFWQDLLKEDIEDQGVLGVDVLAQQLGYLASSYK* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0632 353 SMART hsfneu3 41 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g0632 353 Gene3D - 37 136 IPR036388 -
Pvu7g0632 353 Coils Coil 162 182 - -
Pvu7g0632 353 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 8 336 IPR027725 -
Pvu7g0632 353 ProSitePatterns HSF-type DNA-binding domain signature. 84 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g0632 353 SUPERFAMILY "Winged helix" DNA-binding domain 41 134 IPR036390 -
Pvu7g0632 353 Pfam HSF-type DNA-binding 45 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g0632 353 PRINTS Heat shock factor (HSF) domain signature 45 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g0632 353 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g0632 353 PRINTS Heat shock factor (HSF) domain signature 96 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g0632 353 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 8 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0632 Pvu-Chr7 5381401 5383424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0632 23 351 HSF AT3G22830 54.521 2.17e-119 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pvu7g0632 HSF_DNA-bind 2.7e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0632 K09419 - gmx:100809515 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0419 2 3867113 3870724 Pvu7g0632 7 5381401 5383424 PCT