Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0623 ATGGGGAAGACAGGAAAATGGCTTAGAAACTTGTTGACAGGTAAGAAAGACAAGGAAAAGGAGAAGGAAAAATCTACATCTAACCTGATTTCTTCTTCAAATGGAACAGAAAACTCAGCCACTCCAACTTCCACAACCCCAAAGGAGAAAAAGAGATGGAGTTTCAGAAGATCATCAGCCACTTCCACAGCCACACCAATAGCAACTTCCAAGGAATTGAATTTTGTAGAACCAAATGCCACTGCTTCACAGACAGTGCAAGCTGACAATGATAATCAGAATGAGCAAAGGAAGCATACCATGGCTGTGGCTGCTGCCACTGCAGCAGCAGCTGATGCTGCGGTGGCAGCTGCTCAGGCTGTAGCTGTTGTGATCCGTTTGACTTCTGCTTCCAATGCAACATCTAAAAGCTTTGAAGAGGCTGCTGCCATTAAAATCCAATCAGTCTTTCGGTCTCACTTGGCAAGGAAAGCATTGTGCGCTCTAAGAGGACTAGTGAAGTTGCAGGCACTGGTAAGGGGTCACTTGGTGAGAAAACAAGCCAAAGCAACACTGAGATGCATGCAGGCTTTGGTGACGGCACAAGCTAGAGCTCGTATTCAGAGGATCCGAATGGGTTCAGAAGGAATTCCTAATCAACAACAAAGAAAAGCCACACATGATGATTTGTTCATGCATATATATAATGAAATGGAGAGAGGCTTGGAAGACAACATCAAGATTGTTGAGATGGATGTTGGTGAAAATAAAAATAACTCCAGAAGCAGCAGTGTGTATCATCATGAGCATCAAGAACAACATGACCACAGATTTTCCACACATTATTCAACAAATGGTTCCTACTCGAAGGAAGAAAACTACAAGGTGTCACCAGCTCCATCAGCATTGACAGAGTTGAGCCCAAGAGAATGCAGTGGCCATTTTGAGGACTGTTTCAGCACAGCCCAAAGCAGCCCTCAGTTCCACTCTGCTGTGTCAAGAACAGAAAATTCAAAGCACCCTTTTTCTTTCCCTAGGCCAGCTTATGCAGAATCTATCTGCTATGACTACCCTCTGTTCCCAAATTACATGGCCAACACTGAATCATCAAGGGCCAAAGTCAGATCACATAGTGCACCGAAACAAAGACCAGATTCATTTGAGAAGCAACCAAGCCGGCGAAGAGCTTCAGTTGAGGGAAGAAATGTCCCAAGGCCAATGAGGATGCAAAGGTCATCTTCACATGTGGGTGTTACTGCTCAAAACTATCAATATCCTTGGTCAATCAAGCTTGATAGATCCGCAGTTTCACTCAAAGGCAGCGAGTGTGGCTCTACAAGTACAGTACTTACTACAACTAATTATTGCAGATCTCTTGTTGCATTTGACCCACGTGGAGATAGTTACTGA 1389 0.442 MGKTGKWLRNLLTGKKDKEKEKEKSTSNLISSSNGTENSATPTSTTPKEKKRWSFRRSSATSTATPIATSKELNFVEPNATASQTVQADNDNQNEQRKHTMAVAAATAAAADAAVAAAQAVAVVIRLTSASNATSKSFEEAAAIKIQSVFRSHLARKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQARARIQRIRMGSEGIPNQQQRKATHDDLFMHIYNEMERGLEDNIKIVEMDVGENKNNSRSSSVYHHEHQEQHDHRFSTHYSTNGSYSKEENYKVSPAPSALTELSPRECSGHFEDCFSTAQSSPQFHSAVSRTENSKHPFSFPRPAYAESICYDYPLFPNYMANTESSRAKVRSHSAPKQRPDSFEKQPSRRRASVEGRNVPRPMRMQRSSSHVGVTAQNYQYPWSIKLDRSAVSLKGSECGSTSTVLTTTNYCRSLVAFDPRGDSY* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0623 462 Gene3D - 137 192 - -
Pvu7g0623 462 ProSiteProfiles IQ motif profile. 139 167 IPR000048 GO:0005515
Pvu7g0623 462 MobiDBLite consensus disorder prediction 250 286 - -
Pvu7g0623 462 MobiDBLite consensus disorder prediction 255 272 - -
Pvu7g0623 462 MobiDBLite consensus disorder prediction 57 71 - -
Pvu7g0623 462 MobiDBLite consensus disorder prediction 364 408 - -
Pvu7g0623 462 ProSiteProfiles IQ motif profile. 163 190 IPR000048 GO:0005515
Pvu7g0623 462 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 439 - -
Pvu7g0623 462 Pfam IQ calmodulin-binding motif 141 159 IPR000048 GO:0005515
Pvu7g0623 462 Pfam IQ calmodulin-binding motif 166 182 IPR000048 GO:0005515
Pvu7g0623 462 SMART iq_5 161 182 IPR000048 GO:0005515
Pvu7g0623 462 SMART iq_5 138 160 IPR000048 GO:0005515
Pvu7g0623 462 MobiDBLite consensus disorder prediction 27 48 - -
Pvu7g0623 462 MobiDBLite consensus disorder prediction 367 394 - -
Pvu7g0623 462 MobiDBLite consensus disorder prediction 76 95 - -
Pvu7g0623 462 MobiDBLite consensus disorder prediction 76 91 - -
Pvu7g0623 462 MobiDBLite consensus disorder prediction 10 26 - -
Pvu7g0623 462 Pfam Protein of unknown function (DUF4005) 319 394 IPR025064 -
Pvu7g0623 462 PANTHER IQ-DOMAIN 5-RELATED 1 439 - -
Pvu7g0623 462 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0623 Pvu-Chr7 5259877 5262131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0623 1 450 IQD Protein Family AT4G14750 46.934 6.62e-103 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0623 - - gmx:100817667 714.146