Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0622 ATGGCCTCTCATTCTCCCAAGAGAAAAGGTCCTTATCTTAATGTACTATCCCAAGTTTCCCTTCTTCTAATTCTCATCTCCTTGATCAACCCTTCACAAGCTCAACACTCTTCTTCCCCTCTCCCCCCTCTAAACCCAAGGCTCTCCAAAGCCTACACAGCACTCCAAGCATGGAAACACAAAATCACATCAGACCCTAAGAACTTCACCTTGAACTGGTGTGGCCCCAATGTTTGCAACTACACTGGCATATACTGTGCACCTGCCCCAGATGACCCTCACATCTACACTGTTGCTGGAGTTGACCTAAACCATGCCACCATATCTGGCTCATTGCCAGAAGAACTTGGCCTCTTGACTGACCTAGCACTTTTCCACATAAACTCCAACCGTTTCTGTGGCTCCCTCCCCAGCACCTTCGACCAGCTGAACCTCCTGCATGAACTAGACATAAGTAACAACCAATTCTCAGGACCATTCCCCGAGGTTCTTCTCTGCATCTCTTCGTTAAAATACTTAGACATCAGATTCAATAACTTCTATGGCAGCATTCCCTCGCGCCTCTTCGATCTCAAACTCGATGCCCTTTTCATCAACAACAACAACTTCAAATTCTCCCTGCCTGACAACTTCGCCAACACTTCTGTTTCTGTCCTTGTGTTTGCGAACAATGACCTCAAGGGGTGTCTCCCTTCGAGTTTGGCCAAAATGAAGGGTACCCTTAACGAGATTATCATCACCAACAGTGGCTTAACGGGCTGTTTGCCTAGTGAGATAGGGGATTTGGACAAACTGACAGTGTTTGATGTGAGCTTCAACAAGCTGGTTGGAGATTTGCCCGAGTCCTTGGGGAAAATGAAGAAGTTGGAGCAGTTGAATGTGGCGCATAACATGCTTTCTGGAACGATTCCCGAGAGTGTGTGCATGTTGCCGAAGTTGGAGAATTTCACGTACTCGTACAACTACTTCTGCAGTGAGTCACCACTCTGTCTCAAGTTGAAGGATACGGATGATACCAAGAATTGTATTCCTTATAGGCCATTGCAAAGGTCACCTGATGAGTGTGAAGCTTTTTATAAATATCCTGTTCATTGCAGTGCCTTTGGTTGTGTATCTCCACCGCCTCCACCACCTCCTCCACCACCGCCTCCGCCACCTCCTCCACCACCACCTCCGCCACCTGCAAAATACCACCACTATCCTTGA 1206 0.4751 MASHSPKRKGPYLNVLSQVSLLLILISLINPSQAQHSSSPLPPLNPRLSKAYTALQAWKHKITSDPKNFTLNWCGPNVCNYTGIYCAPAPDDPHIYTVAGVDLNHATISGSLPEELGLLTDLALFHINSNRFCGSLPSTFDQLNLLHELDISNNQFSGPFPEVLLCISSLKYLDIRFNNFYGSIPSRLFDLKLDALFINNNNFKFSLPDNFANTSVSVLVFANNDLKGCLPSSLAKMKGTLNEIIITNSGLTGCLPSEIGDLDKLTVFDVSFNKLVGDLPESLGKMKKLEQLNVAHNMLSGTIPESVCMLPKLENFTYSYNYFCSESPLCLKLKDTDDTKNCIPYRPLQRSPDECEAFYKYPVHCSAFGCVSPPPPPPPPPPPPPPPPPPPPPPAKYHHYP* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0622 401 MobiDBLite consensus disorder prediction 374 401 - -
Pvu7g0622 401 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 377 - -
Pvu7g0622 401 Gene3D Ribonuclease Inhibitor 215 344 IPR032675 -
Pvu7g0622 401 Gene3D Ribonuclease Inhibitor 49 214 IPR032675 -
Pvu7g0622 401 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 24 377 - -
Pvu7g0622 401 SUPERFAMILY L domain-like 52 330 - -
Pvu7g0622 401 Pfam Leucine rich repeat N-terminal domain 52 86 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0622 Pvu-Chr7 5253233 5254667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0622 41 378 Leucine-rich Repeat extension Gene Families AT3G22800 67.353 3.75e-160 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0622 - - gmx:100813811 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0622 7 5253233 5254667 Pvu7g0622 7 5253233 5254667 ECH