Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0549 ATGCAAGACTTTTTGGGCTCTCTTCGCCGGTCCCTGGTTTTCCGAGCCGGCGGCGACGATGCTCCTTTTTCCGGAATCGCCGACAAGCTTGGCTCTGCCATTCGCAAATCGCGAATAGCATTGAAACCTCCTCCTCCTCCCATCCGGTGGCGCAAGGGCGAGTTGATTGGTTCCGGCGCCTTCGGTCACGTCTACATGGGAATGAACCTCGATTCCGGGGAGCTTATTGCCATCAAACAGGTTTTAATCGCGCCTGGTAGCGCTTACAAGGAGAATACACAGGCTAATATTCGGGAGCTCGAAGAAGAAGTCAAGCTTCTCAAGAATCTTAAACATCCAAATATTGTTAGATACTTGGGAACTGCGAGAGAGGAGAATTCCTTAAATATTCTGCTGGAGTTCGTACCTGGTGGTTCTATCTCATCACTTTTGGGGAAATTTGGATCCTTCCCTGAATCCGTTATAAGAATGTATACGAAACAGCTTTTATTAGGCCTTGAATACCTTCACAATAATGGGATTATTCACAGAGATATTAAGGGAGCCAACATTCTAGTTGATAACAAAGGGTGCATTAAACTTGCAGACTTTGGTGCATCCAAGAAAGTTGTTGAACTGGCTACTATCAATGGTGCAAAATCAATGAAGGGCACTCCACACTGGATGTCCCCTGAAGTTATTTTACAAACAGGACATACAATCTCCACTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACTGGAAAGCCTCCATGGAGTCAACAATATCCCCAAGAGGTTTCAGCTCTTTTCTATATTGGGACAACTAAATCTCATCCACCCATACCTGAACATCTGTCTCCTGAGGCAAACGACTTTTTGCTGAAATGTTTCCACAAGGAGCCAGATTTAAGACCTTCTGCATCAGAGTTGTTACAGCATCCGTTCATCACCTGTGACTATCATGGATCTCATTCAGTCTTACGCAGTTCAATCAGGGATTCTTGCAGTAAGATGGCAACATATGGAATGAACTCTAGAACCTTCTTGGATTCTGTCCAGGGATCAACTTGCACTGGCTTGAAGGATGTTTGTCAGATAGATAGCATAAAGTTCTCAACTGTATATCATAAAGCAGATTCCTACCAGAGAGCGGACAACAATGATGATGACATGTGTGTGATGGATGAAGATGATTTTTTGATTGGTTCACCAGTAAAATCTGAATCTCTATTAGCTTCTGATGATACCAAGAGTTGCAATCCTTTGAGCAGACCTGCGGATGACCATCCTTGCAATTTTAATGAAACCCAATATTCAGAGAAAAACAGACCGAACTTGTCATTGTCAAGTGAGCCTCCAGGAACCGAAGATGATGAAGAAGTCACTGAATGTAAAATTAGAGACTTCCTTGATGCTAAGGCCCTTGAACTCAAGAAGCTCCAAACACCTCTTTATGAAGAATTCTTTAACATATCAAATGCAGCCATTGCTCCTACTCCCTTTTCAAAGAGGAAAGTTATTTCGGGTGTCCCAAATGTAACATCAAAAGTCAGATCGCCTAGTCAGGCTTGGAGACGATTCTCAATGGTTGGCAGTGCTACTGTAGCAAGCCCTGGGAGTCATACCATATACCGATCGAAGCATAGTGGTGCTCACTGTCAACCTTTGCAAGAAATTCAGCCACCTGAGCTGAATGAATCAAAGGAGACTCTTCATGATGCTCAGCTAGAATCATCTAGTGTAAGCTCAAACTTCTCTGAGAGGCAAAGGAAATGGAAAGAAGAATTGGTTGAAGAGCTCGAGAGGAAGCGAGAGATTATGCGTCGGGCCGGAACTGGAGGAAAGATTACATCTCCAAAGGATCACAAATTTTATGAAGCCTGA 1875 0.4373 MQDFLGSLRRSLVFRAGGDDAPFSGIADKLGSAIRKSRIALKPPPPPIRWRKGELIGSGAFGHVYMGMNLDSGELIAIKQVLIAPGSAYKENTQANIRELEEEVKLLKNLKHPNIVRYLGTAREENSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHNNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPHWMSPEVILQTGHTISTDIWSVACTVIEMATGKPPWSQQYPQEVSALFYIGTTKSHPPIPEHLSPEANDFLLKCFHKEPDLRPSASELLQHPFITCDYHGSHSVLRSSIRDSCSKMATYGMNSRTFLDSVQGSTCTGLKDVCQIDSIKFSTVYHKADSYQRADNNDDDMCVMDEDDFLIGSPVKSESLLASDDTKSCNPLSRPADDHPCNFNETQYSEKNRPNLSLSSEPPGTEDDEEVTECKIRDFLDAKALELKKLQTPLYEEFFNISNAAIAPTPFSKRKVISGVPNVTSKVRSPSQAWRRFSMVGSATVASPGSHTIYRSKHSGAHCQPLQEIQPPELNESKETLHDAQLESSSVSSNFSERQRKWKEELVEELERKREIMRRAGTGGKITSPKDHKFYEA* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0549 624 MobiDBLite consensus disorder prediction 564 588 - -
Pvu7g0549 624 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Pvu7g0549 624 MobiDBLite consensus disorder prediction 602 624 - -
Pvu7g0549 624 Pfam Protein kinase domain 51 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0549 624 CDD STKc_MAPKKK 49 313 - -
Pvu7g0549 624 PANTHER MAP KINASE KINASE KINASE 34 419 - -
Pvu7g0549 624 PANTHER MAP KINASE KINASE KINASE 433 523 - -
Pvu7g0549 624 Coils Coil 90 110 - -
Pvu7g0549 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Pvu7g0549 624 SMART serkin_6 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0549 624 MobiDBLite consensus disorder prediction 427 449 - -
Pvu7g0549 624 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 433 523 - -
Pvu7g0549 624 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 34 419 - -
Pvu7g0549 624 Gene3D Transferase(Phosphotransferase) domain 1 49 343 - -
Pvu7g0549 624 ProSiteProfiles Protein kinase domain profile. 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0549 624 SUPERFAMILY Protein kinase-like (PK-like) 49 314 IPR011009 -
Pvu7g0549 624 Coils Coil 587 607 - -
Pvu7g0549 624 MobiDBLite consensus disorder prediction 409 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0549 Pvu-Chr7 4331143 4344085 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0549 1 612 MAP Kinase Kinase Kinase AT3G06030 54.947 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu7g0549 Pkinase 3.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0549 - K20606 gmx:100795863 1060.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0549 7 4331143 4344085 Pvu7g0549 7 4331143 4344085 ECH
Pvu6g1540 6 26114743 26116104 Pvu7g0549 7 4331143 4344085 ECH