Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0537 ATGATCAGACGCAAAGCTTCCGTTAACGTTGTTCCTTATTCTGATTATGGGATGGGTGCCGTTTCTTGCATGCTTCTTTTCTTTCTCTGTGGTGTATTATCTCAAGCCAACGCCCAGTATCTCTTCCAATCCTGTGATAACAGCAACGGAAACTACACAGCCAATAGCACCTATAACACCAATCTCATCACCCTTTTATCCAATCTTTCTTCCAACACGGAAATCAACTATGGTTTCTACAACTTCTCTCATGGTCAAAACGCAGACAAAGTGAACGCTATTGGGTTGTGCAGGGGAGATGTGGAGCCAAATGAGTGCCGCAGTTGCCTCAAAGATGCCGGAGGCAATATCACACAGCTTTGTCCAAACCAGAAAGAGGCTACTATATATTATGACAACTGCCTGTTGCGCTACTCAAACCACTCAATATTTGGGGTCTTGGACATTTCTCCTGATTTTTATATGGCAAACCCAAACAATGCAACAGAAGTGGTTGAGTTCAATCGAGTGCTCGACGACTTATTGAAGGAACTCAAAGGCAAAGCAGCCTCCGGTGACTCTCGTCGTAAGTATGCTACGGATAATGACACAACTATGAATTTTCAAACCATATATGGTCTTTTGCAGTGCTCCCCTGATTTGACTCAGACAGACTGCAATGATTGCTTGGATGAGGCTATCACACGAATACCAACTTGCTGCGACGACAGGAGAGGTGGTAGAGTTGTTGGACCCAGTTGTAATATTAGATATGAAAACTACCGCTTCTACGAACAAACCACGATAATAGACCCAGAGACACCACCACCATCCACAATTAACACTTCCCCGGAAGAAAGTAGCAACACAACAATAATTGTCATTGCCGTAATTGTGCCTGCTGCTGCTGTTGTTTTGGTCACCTGTCTCTTCCTGTATTTAAGGAGGAGGAAGGCAAGGAAAAATCTTGCAGTTAAAGAAGAAGAAGATGAAAAGGAGGAGGATGAAATTAGCATTGTTGAGTCATTGCAATTCAACTTTGACACAATACGAGTTGCTACCGAGGACTTTTCTGATTCTAATAAACTTGGACAAGGTGGATTTGGAGCTGTTTACTGGGGTAGGCTCTCCAATGGACAGATAATTGCAGTCAAAAGGTTGTCAAGAGATTCTGGGCAAGGAGATACGGAATTTAAGAATGAAGTGCTTTTAGTTGTCAAGCTTCAGCACCGAAATTTAGTCAGGCTACTTGGTTTCTGCTTGGAAGGAAGAGAAAGACTACTTGTCTATGAATTTGTTCCCAATAAAAGCCTTGATTACTTCATATTTGATCCATCCATGAAAGCCCAATTGGATTGGGAAAAGCGCTACAAAATCATTAGAGGTATTGCTCGAGGTCTTCTCTACCTTCACGAAGATTCTCAGCTACGAATTATCCATCGAGATCTCAAAGCAAGCAACATTCTCTTAGACCAAGAGATGAATCCTAAGATAGCAGATTTTGGCATGGCCAGACTGGTTTTAATGGATCAAACTCAAGCAAATACCAGTAGAATTGTTGGAACCTATGGATATATGGCACCGGAGTATGCGATGCATGGACAGTTTTCAGTGAAATCAGACGTCTTCAGTTTTGGTGTACTGATTCTTGAGATTGTAAGCGGCCAGAAAAACAGTGGAATTAATAATGGAGAGAATATGGAGGATCTACTAAACTTCGCTTGGAGAAACTGGAAGGAGGGGAAGGCTATAAATATTGTAGATCCATCACTGAACAGCAATTCACGGAATGAAATGCTGAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAAAATTTAGTTGACAGACCAACCATGGCTAACATTGTGCTGATGCTTAACAGCTATTCTCTGAGTCTCCCGATTCCTGCAGAACCAGCATTTTATATGAACAGTAGAACTAGAAGCCTTCCAGAGATGCAGTCATGGGATTATAATTCACGGGAAACAGGATCAAGTGAACCAATACTTAAATCGGCTCAAGAATCAGAAAATGAAGTTTCAATTACTGAGCTATACCCTCGCTAG 2049 0.4187 MIRRKASVNVVPYSDYGMGAVSCMLLFFLCGVLSQANAQYLFQSCDNSNGNYTANSTYNTNLITLLSNLSSNTEINYGFYNFSHGQNADKVNAIGLCRGDVEPNECRSCLKDAGGNITQLCPNQKEATIYYDNCLLRYSNHSIFGVLDISPDFYMANPNNATEVVEFNRVLDDLLKELKGKAASGDSRRKYATDNDTTMNFQTIYGLLQCSPDLTQTDCNDCLDEAITRIPTCCDDRRGGRVVGPSCNIRYENYRFYEQTTIIDPETPPPSTINTSPEESSNTTIIVIAVIVPAAAVVLVTCLFLYLRRRKARKNLAVKEEEDEKEEDEISIVESLQFNFDTIRVATEDFSDSNKLGQGGFGAVYWGRLSNGQIIAVKRLSRDSGQGDTEFKNEVLLVVKLQHRNLVRLLGFCLEGRERLLVYEFVPNKSLDYFIFDPSMKAQLDWEKRYKIIRGIARGLLYLHEDSQLRIIHRDLKASNILLDQEMNPKIADFGMARLVLMDQTQANTSRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLILEIVSGQKNSGINNGENMEDLLNFAWRNWKEGKAINIVDPSLNSNSRNEMLRCIHIGLLCVQENLVDRPTMANIVLMLNSYSLSLPIPAEPAFYMNSRTRSLPEMQSWDYNSRETGSSEPILKSAQESENEVSITELYPR* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0537 682 Pfam Protein tyrosine and serine/threonine kinase 353 618 IPR001245 GO:0004672|GO:0006468
Pvu7g0537 682 SMART serkin_6 350 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0537 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Pvu7g0537 682 ProSiteProfiles Gnk2-homologous domain profile. 149 256 IPR002902 -
Pvu7g0537 682 SUPERFAMILY Protein kinase-like (PK-like) 335 652 IPR011009 -
Pvu7g0537 682 Gene3D Transferase(Phosphotransferase) domain 1 426 627 - -
Pvu7g0537 682 Gene3D - 36 142 IPR038408 -
Pvu7g0537 682 Gene3D - 152 256 IPR038408 -
Pvu7g0537 682 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Pvu7g0537 682 Gene3D Phosphorylase Kinase; domain 1 311 425 - -
Pvu7g0537 682 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 25 656 - -
Pvu7g0537 682 ProSiteProfiles Gnk2-homologous domain profile. 40 143 IPR002902 -
Pvu7g0537 682 ProSiteProfiles Protein kinase domain profile. 350 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0537 682 MobiDBLite consensus disorder prediction 648 682 - -
Pvu7g0537 682 CDD STKc_IRAK 356 621 - -
Pvu7g0537 682 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 656 - -
Pvu7g0537 682 Coils Coil 309 329 - -
Pvu7g0537 682 MobiDBLite consensus disorder prediction 648 675 - -
Pvu7g0537 682 Pfam Salt stress response/antifungal 45 140 IPR002902 -
Pvu7g0537 682 Pfam Salt stress response/antifungal 159 254 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0537 Pvu-Chr7 4226176 4229514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0537 50 682 Receptor kinase-like Gene Family AT4G21410 50.840 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g0537 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0537 - - vra:106771832 1150.96