Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0527 ATGGCTTCATTTAACTTCTTCATTTTGCACCTAACCTTCTTTTCCCTCTTTCTTCATTGCTCCCCTTCTCCCATCACCCAAGGTGCTTTGGACGGAGCTTCAAAAGCTTACTATAACTGCACAAGGAACAGCACTTTTGCTTCCTATAGCGTGGCTTACCGTTCTAACGTCAAAACACTCCTAGATTGGCTCTCCTCCAATGTCACTAACAATGCCAGATTCTACAACACCACAGTAGCTAGCAGACACGCAGCAGACACTGCCTATGGTAGCTTCCTTTGTACAATAAACCCTGAAATCTGCCAACGATGCGTGAAAGAAGCTGCCAAACTTTTATCATCGCTTTGCACCATTGCCAAAGAGGCTATCATATGGTACGAAGTGTGCTATGTGCGCTACTCTGATCGTCGTTTCTTCTCCACTGTGGAGGTGAGTCCTAAACTCTCCTTTATGAATGATCAGGACTACGTGGGTGACGTTGGACGCTTCAACAATATTGTCTGGGATATGCTGAACGATTTGAGAAGTGAGGCAGCAAGTGCTTCTAATAAAAGCGCTGATAAGTCTGTGAACATCACGGATAACCAAAAGTCGTATGGCCATGCTTGGTGCCTACCATACCTCACCAAAGAGAACTGCAGCTGGTGTCTTAGCGAGGCCATAGCAGACATTCCAACCGGTTGCTGCAGAGGAAAATCTGGGGGACACGTAATATTTCCCAGTTGTGGTGTTAGATACGAATTATATCCATTCCGTATGGCACATGTAAATAGTGGTTGGGTGTCTCCGCCACCACTTCCCGATAGTCCTCCCCCTTTTGCTTCATCAGGGAAAAGAAAACAGAAGACACTAACAATAATTGTGACTGTTGTTCCAATTGTTGTTTCACTGGTGCTTTTATCCTTGGGCTGCAGTTGTTTTCTACGTAGGAAAGAAACAAAGAATCAGCATGACATTCTCAAAGAAAGCTTTGGGAATGACAGTACCACTTTGGAGTCCTTGAGATTTGAATTAGCGAAAATTGAAGCTGCAACAAATAGATTTGCTAAAGAAAACATGATAGGCAAAGGCGGATTTGGAGAAGTCTATAGGGGTATTCTTTCTGATGGACAAGAAATAGCTGTGAAGAGGCTTACAGGAAGCTCTCGGCAAGGTGCAGTAGAGTTTAAAAATGAGGTTCAAGTTATAGCCAAGCTTCAACATAGAAATTTAGTGAGATTACTAGGATTTTGCTTAGAAGATGATGAAAAGATACTCATTTACGAGTACGTGAAAAACAAGAGTCTTGATTATTTTTTATCAGATATCAAGAAGCGAGCACTATTATCTTGGTCTGAACGACAGAAGATTATAAGAGGAATTGCACGAGGCATTTTATATCTACACGAAGATTCTTGTCTAAAAATAATACATCGTGATCTTAAACCTAGTAATGTTTTATTAGATAGTAATATGAATCCAAAGATTTCAGATTTTGGTATGGCTAGAATTGTTGCTGGAGATGAAATTGAAGAAAGTACCGGCAGAATTGTAGGAACATATGGTTATATGCCTCCTGAGTATGCAATGCATGGACAATTTTCAGTGAAATCTGATGTATTTAGTTTTGGAGTTATGGTTCTAGAGATTATTAGTGGAATAAGAAAATGTTGTTCATCTGAATCAGAGGTTATTGATGACATCCGAAAACATGCTTGGACAAAGTGGACAAAGGAAACACCACTAGAACTATTGGATCCTCATGTAGGAGGACCTTATTCTTGCGAAGAAGTCATCAAATATATCCACATTGGTTTGTTGTGTGTTCAGGAAGATCCAAACGACAGACCTACAATGGCAACAATTGTTTTTTACCTCAACAACCATTCAATCAATTTGCCTTCCCCGAATGAACCAGGCTATTTTAAGAGTAATAGAAAAGACAACATGGCTACCAATGAGGAATTGGATAATATCATTGATTCCATCAATGAAATTTCTCTAACTAAATTCTTTCCTCGATAA 2004 0.4007 MASFNFFILHLTFFSLFLHCSPSPITQGALDGASKAYYNCTRNSTFASYSVAYRSNVKTLLDWLSSNVTNNARFYNTTVASRHAADTAYGSFLCTINPEICQRCVKEAAKLLSSLCTIAKEAIIWYEVCYVRYSDRRFFSTVEVSPKLSFMNDQDYVGDVGRFNNIVWDMLNDLRSEAASASNKSADKSVNITDNQKSYGHAWCLPYLTKENCSWCLSEAIADIPTGCCRGKSGGHVIFPSCGVRYELYPFRMAHVNSGWVSPPPLPDSPPPFASSGKRKQKTLTIIVTVVPIVVSLVLLSLGCSCFLRRKETKNQHDILKESFGNDSTTLESLRFELAKIEAATNRFAKENMIGKGGFGEVYRGILSDGQEIAVKRLTGSSRQGAVEFKNEVQVIAKLQHRNLVRLLGFCLEDDEKILIYEYVKNKSLDYFLSDIKKRALLSWSERQKIIRGIARGILYLHEDSCLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVAGDEIEESTGRIVGTYGYMPPEYAMHGQFSVKSDVFSFGVMVLEIISGIRKCCSSESEVIDDIRKHAWTKWTKETPLELLDPHVGGPYSCEEVIKYIHIGLLCVQEDPNDRPTMATIVFYLNNHSINLPSPNEPGYFKSNRKDNMATNEELDNIIDSINEISLTKFFPR* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0527 667 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
Pvu7g0527 667 CDD STKc_IRAK 354 621 - -
Pvu7g0527 667 Pfam Protein kinase domain 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0527 667 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Pvu7g0527 667 Gene3D Transferase(Phosphotransferase) domain 1 424 628 - -
Pvu7g0527 667 SUPERFAMILY Protein kinase-like (PK-like) 331 645 IPR011009 -
Pvu7g0527 667 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Pvu7g0527 667 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 667 - -
Pvu7g0527 667 ProSiteProfiles Protein kinase domain profile. 348 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0527 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Pvu7g0527 667 SMART serkin_6 348 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0527 667 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 667 - -
Pvu7g0527 667 Gene3D - 33 138 IPR038408 -
Pvu7g0527 667 Gene3D - 147 251 IPR038408 -
Pvu7g0527 667 Pfam Salt stress response/antifungal 159 249 IPR002902 -
Pvu7g0527 667 Pfam Salt stress response/antifungal 40 135 IPR002902 -
Pvu7g0527 667 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0527 Pvu-Chr7 4133657 4138129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0527 7 667 Receptor kinase-like Gene Family AT4G05200 43.294 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g0527 Pkinase 7.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0527 - - gmx:100793219 1077.39