Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0525 ATGGCTTGGTATCTCAAATATGTGATACCATTAATCTTTTCTATCATCACCCTCAACTTCACTGCGACCAGAGCACAGGGCCTTTCTTATCAGTACCAAGTTTGTTCAACAAACAAATTCACTCCCAATAGCACCTTCCAGAGGGACCTCACAACCCTCTTCTCTTCCTTATCTTCCACAGCCTCCAGCAATGTCGAATTCTTCAACAACACCGTCACGGCGGGGACAAACTCCTCCGACACAGTGTACGGACTATTCTTGTGCAGGGGTGACATCCCCTCCGACCTATGCAATCACTGTGTCGGAAACGCAACACAGAGACTGTCCACACACGCAGACTGCACCTTGTCCAAAGCAGCAGTGGTGTATTACGACGAGTGCATAGTTAGGTATTCGAACCGTTCTTTCTTCTCCACCCTAACCATGCAAGCCGGCTATGCCCTTTGGAACCCCACCAATATGACCAACCAAGAAAGCTTCAAGAGGTTACTCTATGACACCATGAACAAAACTGCGGATGATGCAGCCCATTTTCCTACCGGTGCTAAAAAGTTCGCCACAAGGGAAACCAGCATAGACATATTTCAGAAGCTTTATTGTCTTGCTCAGTGCACACAAGACCTGTTTCCCGGAGATTGCAGAAGCTGTCTGGATAGCTTGATAAACTCGGATCTTCCAGGGTGCTGCGCAGGATCGCAGGGAGGAAGAGTTTATTACCCAAACTGCATCATCAGGTTTGAAATTTACCCTTTTTTTCGATCCCTTCCCACGGCACCAACGCCATCACCGGCAGGACTCGTTCCTCCAACCAATTCAGGAGAAAATAAAAGTAGATCTCGAACAATTATCTTAATTGTTGTTCCCATTGTTAGTTTGGCGACTTTCTTAACTCTATTATACTATGTGCTATGGAGAAGAGCAAGAAAGAGTAGCAAGATTCTTCTTAGAAAAAATTTTGGGGAAGAAAGTTCCACTCTACAGGGATTGCAATTTGATTTGGTCACGATTAAAGAAGCAACAAATAACTTCTCCCCTGAGAACGAGATTGGAAAAGGTGGATTTGGAGAGGTTTACAAGGGTATTCTTCTTGATGGACGATATATAGCGGTTAAAAGACTTTCGAAAAGTTCAAGACAAGGGTCAGTCGAGTTTAGAAATGAAATTTTATTGATAGCCAAACTTCAACATAAAAATCTTGTGGCATTCATAGGATTTTGTTTGGAAGAGGAAGAAAAAATTCTTATTTACGAATATGTGTCAAATCGTAGTCTGGACTACTTTTTGTTTGGTTATCCGGAGGAGAAGTTAAGTTGGTATCAACGTTATAACATTATAAAAGGAACTGCTCTTGGAATTTTTTACTTACATGAGTATTCTCGACTTAAAGTTATTCATCGTGATCTTAAACCCAGTAATGTTTTATTGGATGAAAACATGAATCCTAAAATATCAGATTTTGGATTGGCTAGAATTGTTGATATAGATCAAAATCGTGCAGAAACTAATCGAATCGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTTGGACAATTCTCTGAAAAATCAGATGTTTTTAGTTTTGGAATTATGATTCTTGAGATTATTACTGGAAAAAAAAATGGAAATTCTTATAAATCCAACGAAGATGACGGAGGCTTGATGAGTAATGTTTGGAGAAATTGGACAAATCAAACACCATTGAGTATACTTGAACCAAATATGAAAGAAAATTACTTTGAAACTGAAGTGATTCGATGCATTGAAATTGGTTTATTATGTGTTCAAGAAAATCCAAATATGAGACCTACCATTGCAGAAGTTGTTTCTTATCTTAATGATCTCACAATTGAATTACCATCCCCTCAAGAACCAGCATTTTTCTCTCATGGAATAGATCAAAAAGCAGTCATGCAGCAGGAATCAAGTTCGAACTCATCTGTGATTGGTTCCATGCCATTCTCTGTCAATGAAATGTCTATTAGTGACTTTTATCCACGATAA 2010 0.3945 MAWYLKYVIPLIFSIITLNFTATRAQGLSYQYQVCSTNKFTPNSTFQRDLTTLFSSLSSTASSNVEFFNNTVTAGTNSSDTVYGLFLCRGDIPSDLCNHCVGNATQRLSTHADCTLSKAAVVYYDECIVRYSNRSFFSTLTMQAGYALWNPTNMTNQESFKRLLYDTMNKTADDAAHFPTGAKKFATRETSIDIFQKLYCLAQCTQDLFPGDCRSCLDSLINSDLPGCCAGSQGGRVYYPNCIIRFEIYPFFRSLPTAPTPSPAGLVPPTNSGENKSRSRTIILIVVPIVSLATFLTLLYYVLWRRARKSSKILLRKNFGEESSTLQGLQFDLVTIKEATNNFSPENEIGKGGFGEVYKGILLDGRYIAVKRLSKSSRQGSVEFRNEILLIAKLQHKNLVAFIGFCLEEEEKILIYEYVSNRSLDYFLFGYPEEKLSWYQRYNIIKGTALGIFYLHEYSRLKVIHRDLKPSNVLLDENMNPKISDFGLARIVDIDQNRAETNRIVGTYGYMSPEYAMFGQFSEKSDVFSFGIMILEIITGKKNGNSYKSNEDDGGLMSNVWRNWTNQTPLSILEPNMKENYFETEVIRCIEIGLLCVQENPNMRPTIAEVVSYLNDLTIELPSPQEPAFFSHGIDQKAVMQQESSSNSSVIGSMPFSVNEMSISDFYPR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0525 669 SUPERFAMILY Protein kinase-like (PK-like) 327 650 IPR011009 -
Pvu7g0525 669 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Pvu7g0525 669 ProSiteProfiles Protein kinase domain profile. 343 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0525 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 268 653 - -
Pvu7g0525 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 257 - -
Pvu7g0525 669 Gene3D Phosphorylase Kinase; domain 1 306 418 - -
Pvu7g0525 669 Gene3D Transferase(Phosphotransferase) domain 1 419 625 - -
Pvu7g0525 669 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 268 653 - -
Pvu7g0525 669 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 19 257 - -
Pvu7g0525 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Pvu7g0525 669 SMART serkin_6 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0525 669 CDD STKc_IRAK 349 617 - -
Pvu7g0525 669 Gene3D - 28 136 IPR038408 -
Pvu7g0525 669 Gene3D - 142 251 IPR038408 -
Pvu7g0525 669 ProSiteProfiles Gnk2-homologous domain profile. 28 136 IPR002902 -
Pvu7g0525 669 Pfam Protein kinase domain 346 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0525 669 Pfam Salt stress response/antifungal 35 133 IPR002902 -
Pvu7g0525 669 Pfam Salt stress response/antifungal 153 248 IPR002902 -
Pvu7g0525 669 ProSiteProfiles Gnk2-homologous domain profile. 142 251 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0525 Pvu-Chr7 4095820 4100284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0525 12 669 Receptor kinase-like Gene Family AT4G05200 43.870 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g0525 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0525 - - vun:114191422 1181.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0525 7 4095820 4100284 Pvu2g0510 2 4617086 4620529 PCT